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Report for CCDS1339.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1339.1 Public Homo sapiens 1 ACBD6 24 110 108 CCDS HistoryNCBI Gene:84320Re-query CCDS DB by CCDS ID:1339.1Re-query CCDS DB by GeneID:84320See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1339.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000367595.4 ENSP00000356567.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000367595.4Link to Ensembl Protein Viewer:ENSP00000356567.3Re-query CCDS DB by Nucleotide ID:ENST00000367595Re-query CCDS DB by Protein ID:ENSP00000356567
Original member Current member EBI ENST00000642319.1 ENSP00000495710.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000642319.1Link to Ensembl Protein Viewer:ENSP00000495710.1Re-query CCDS DB by Nucleotide ID:ENST00000642319Re-query CCDS DB by Protein ID:ENSP00000495710
Original member Current member NCBI NM_032360.4 NP_115736.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032360.4Link to Protein Sequence:NP_115736.1Re-query CCDS DB by Nucleotide ID:NM_032360Re-query CCDS DB by Protein ID:NP_115736Link to BLAST:NP_115736.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115736.1 282 Q9BR61 282 100% 0 0

Chromosomal Locations for CCDS 1339.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 180288363 180288517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 180314692 180314722 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 180397516 180397605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 180413366 180413471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 180430180 180430262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 180492269 180492365 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 180495461 180495525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 180502045 180502266 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (849 nt):
ATGGCTTCATCATTCCTGCCCGCGGGGGCCATCACCGGCGACAGCGGTGGAGAGCTGAGCTCAGGGGACG
ACTCCGGGGAGGTGGAGTTCCCCCATAGCCCTGAGATCGAGGAGACCAGTTGCCTGGCCGAGCTGTTTGA
GAAGGCTGCCGCGCACCTGCAAGGCCTGATTCAGGTGGCCAGCAGGGAGCAGCTCTTGTACCTGTATGCC
AGGTACAAACAGGTCAAAGTTGGAAATTGTAATACTCCTAAACCAAGCTTCTTTGATTTTGAAGGAAAGC
AAAAATGGGAAGCTTGGAAAGCACTTGGTGATTCAAGCCCCAGCCAAGCAATGCAGGAATATATCGCAGT
AGTTAAAAAACTAGATCCAGGTTGGAATCCTCAGATACCAGAGAAGAAAGGAAAAGAAGCAAATACAGGT
TTTGGTGGGCCAGTTATTAGTTCTCTATATCATGAAGAAACCATCAGGGAAGAAGACAAAAATATATTTG
ATTACTGCAGGGAAAACAACATTGACCATATAACCAAAGCCATCAAATCGAAAAATGTGGATGTGAATGT
GAAAGATGAAGAGGGTAGGGCTCTACTTCACTGGGCCTGTGATCGAGGACATAAGGAACTAGTCACAGTG
TTGCTGCAACATAGAGCTGACATTAACTGTCAGGACAATGAAGGCCAAACAGCTCTACATTATGCCTCTG
CCTGTGAGTTTCTGGATATTGTAGAGCTGCTGCTCCAGTCTGGTGCTGACCCCACTCTCCGAGACCAGGA
TGGCTGCCTGCCAGAGGAGGTGACAGGCTGCAAAACAGTTTCTTTGGTGCTGCAGCGGCACACAACTGGC
AAGGCTTAA

Translation (282 aa):
MASSFLPAGAITGDSGGELSSGDDSGEVEFPHSPEIEETSCLAELFEKAAAHLQGLIQVASREQLLYLYA
RYKQVKVGNCNTPKPSFFDFEGKQKWEAWKALGDSSPSQAMQEYIAVVKKLDPGWNPQIPEKKGKEANTG
FGGPVISSLYHEETIREEDKNIFDYCRENNIDHITKAIKSKNVDVNVKDEEGRALLHWACDRGHKELVTV
LLQHRADINCQDNEGQTALHYASACEFLDIVELLLQSGADPTLRDQDGCLPEEVTGCKTVSLVLQRHTTG
KA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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