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Report for CCDS10237.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10237.1 Public Homo sapiens 15 THAP10 24 110 108 CCDS HistoryNCBI Gene:56906Re-query CCDS DB by CCDS ID:10237.1Re-query CCDS DB by GeneID:56906See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10237.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000249861.9 ENSP00000249861.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000249861.9Link to Ensembl Protein Viewer:ENSP00000249861.4Re-query CCDS DB by Nucleotide ID:ENST00000249861Re-query CCDS DB by Protein ID:ENSP00000249861
Original member Current member NCBI NM_020147.4 NP_064532.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020147.4Link to Protein Sequence:NP_064532.1Re-query CCDS DB by Nucleotide ID:NM_020147Re-query CCDS DB by Protein ID:NP_064532Link to BLAST:NP_064532.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_064532.1 257 Q9P2Z0 257 100% 0 0

Chromosomal Locations for CCDS 10237.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 70882454 70882650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 70882761 70882908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 70891844 70892272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (774 nt):
ATGCCGGCCCGTTGTGTGGCCGCCCACTGCGGCAACACCACCAAGTCTGGGAAGTCGCTGTTCCGCTTTC
CCAAGGACCGGGCCGTGCGGCTGCTCTGGGACCGCTTCGTGCGGGGTTGCCGCGCCGACTGGTACGGAGG
CAATGACCGCTCGGTCATCTGCTCTGACCACTTTGCCCCAGCCTGTTTTGACGTCTCTTCGGTTATCCAG
AAGAACCTGCGCTTCTCCCAGCGCCTGAGGCTGGTGGCAGGCGCCGTGCCCACCCTGCACCGGGTGCCCG
CCCCGGCACCTAAGAGGGGAGAGGAGGGAGACCAAGCAGGCCGCCTGGACACGCGAGGAGAGCTCCAGGC
AGCCAGGCATTCTGAGGCTGCCCCAGGTCCAGTCTCCTGTACACGCCCCCGAGCTGGGAAGCAGGCTGCA
GCTTCACAGATTACGTGTGAAAATGAACTTGTGCAAACCCAACCCCATGCTGATAATCCATCTAATACTG
TCACTTCAGTACCTACTCACTGTGAAGAAGGCCCAGTGCATAAAAGTACACAAATTTCTTTGAAAAGGCC
CCGTCACCGTAGTGTGGGTATTCAAGCCAAAGTGAAAGCGTTTGGAAAAAGACTGTGTAATGCAACTACT
CAGACAGAGGAATTGTGGTCTAGAACTTCCTCTCTCTTTGACATTTACTCCAGTGATTCAGAAACAGATA
CAGACTGGGATATCAAGAGTGAACAGAGTGATTTGTCTTATATGGCTGTACAGGTGAAAGAAGAAACATG
TTAA

Translation (257 aa):
MPARCVAAHCGNTTKSGKSLFRFPKDRAVRLLWDRFVRGCRADWYGGNDRSVICSDHFAPACFDVSSVIQ
KNLRFSQRLRLVAGAVPTLHRVPAPAPKRGEEGDQAGRLDTRGELQAARHSEAAPGPVSCTRPRAGKQAA
ASQITCENELVQTQPHADNPSNTVTSVPTHCEEGPVHKSTQISLKRPRHRSVGIQAKVKAFGKRLCNATT
QTEELWSRTSSLFDIYSSDSETDTDWDIKSEQSDLSYMAVQVKEETC


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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