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Report for CCDS93389.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93389.1 Public Homo sapiens 3 CEP63 24 110 108 CCDS HistoryNCBI Gene:80254Re-query CCDS DB by CCDS ID:93389.1Re-query CCDS DB by GeneID:80254See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 93389.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000682458.1 ENSP00000507263.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000682458.1Link to Ensembl Protein Viewer:ENSP00000507263.1Re-query CCDS DB by Nucleotide ID:ENST00000682458Re-query CCDS DB by Protein ID:ENSP00000507263
Original member Current member EBI ENST00000682402.1 ENSP00000507548.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000682402.1Link to Ensembl Protein Viewer:ENSP00000507548.1Re-query CCDS DB by Nucleotide ID:ENST00000682402Re-query CCDS DB by Protein ID:ENSP00000507548
Original member Current member NCBI NM_001353109.1 NP_001340038.1 Accepted alive Link to Nucleotide Sequence:NM_001353109.1Link to Protein Sequence:NP_001340038.1Re-query CCDS DB by Nucleotide ID:NM_001353109Re-query CCDS DB by Protein ID:NP_001340038Link to BLAST:NP_001340038.1

Chromosomal Locations for CCDS 93389.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 134495321 134495364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 134507109 134507286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 134531845 134531940 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 134532778 134532900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 134537155 134537268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 134545586 134545819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 134546149 134546288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 134549062 134549176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 134550063 134550260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 134551926 134552012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 134558142 134558347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 134559150 134559429 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 134561377 134561535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1974 nt):
ATGGAGGCTTTGTTAGAAGGAATACAAAATCGAGGGCATGGTGGGGGATTTTTGACATCTTGTGAAGCAG
AACTACAGGAGCTCATGAAACAGATTGACATAATGGTGGCTCATAAAAAATCTGAATGGGAAGGACGTAC
ACATGCTCTAGAAACTTGCTTGAAAATCCGTGAACAGGAACTTAAGAGTCTTAGGAGTCAGTTGGATGTG
ACACATAAGGAGGTTGGAATGTTGCATCAGCAGGTAGAAGAACATGAAAAAATCAAGCAAGAGATGACCA
TGGAATATAAGCAGGAGTTGAAGAAACTACATGAAGAATTATGCATACTGAAGAGAAGCTATGAAAAGCT
TCAGAAAAAGCAAATGAGGGAATTCAGAGGAAATACCAAAAATCACAGGGAAGATCGGTCTGAAATTGAG
AGGTTAACTGCAAAAATAGAGGAATTCCGTCAGAAATCGCTGGACTGGGAGAAGCAACGCTTGATTTATC
AGCAACAGGTATCTTCACTGGAGGCACAAAGGAAGGCTCTGGCTGAACAATCAGAGATAATTCAGGCTCA
GCTTGTCAATCGGAAACAGAAATTAGAGTCTGTGGAACTTTCTAGCCAATCAGAAATTCAACACTTAAGC
AGTAAACTGGAGCGGGCTAATGACACTATCTGTGCCAATGAGTTGGAAATAGAGCGCCTCACCATGAGGG
TCAATGACTTGGTTGGAACCAGTATGACTGTCCTACAGGAGCAGCAGCAAAAAGAAGAAAAATTGAGGGA
ATCTGAAAAACTATTAGAGGCTCTGCAGGAAGAAAAGAGAGAATTGAAGGCAGCTCTTCAGTCTCAAGAA
AATCTCATACATGAGGCCAGAATACAAAAGGAGAAGTTACAAGAAAAAGTAAAGGCAACTAACACTCAAC
ATGCTGTAGAAGCTATAAGTTTGGAATCTGTGAGTGCAACGTGTAAACAGCTGAGCCAAGAACTAATGGA
AAAATATGAAGAACTGAAGAGGATGGAAGCACATAACAATGAATACAAAGCAGAGATTAAGAAGTTGAAA
GAACAGATTTTACAGGGTGAACAAAGTTACAGTTCTGCACTAGAAGGAATGAAGATGGAAATCTCCCATC
TAACTCAGGAGTTACATCAGCGAGATATCACTATTGCTTCCACCAAAGGTTCTTCCTCAGACATGGAAAA
GCGACTCAGAGCAGAGATGCAAAAGGCAGAAGACAAAGCAGTAGAGCATAAGGAGATTTTGGATCAGCTG
GAGTCACTCAAATTAGAAAATCGTCATCTTTCTGAAATGGTGATGAAATTGGAATTGGGTTTACATGAGG
CAAAAGAGATTTCACTAGCAGACCTCCAGGAGAATTATATTGAGGCATTAAATAAATTAGTGTCTGAAAA
TCAACAACTACAGAAAGATTTGATGAATACCAAATCTCAGCTGGAGATTTCTACTCAGATGTGCAAAAAA
CAAAATGACAGGATCTTTAAACCAACACACAGCAGAACAACTGAGTTCAAGAATACAGAGTTCAAGCCAA
CCCATGGCCAGCACAGACATGATGGAATAAAGACTGAGCACTACAAAACAGATCTTCATTCTCCAAGAGG
ACAAGCGTCGGATAGTATAAACCCCATGTCTAGGGTGCTAAGCCCCCTGAGTCCTCAAATCAGCCCTTGC
AGCTCCACCAGGTCTTTGACTTCCTACTCTCTATGTAAAACTCATTCTTTGCCTTCAGCGCTAGATACAA
ATGAAGCCAATTTTTCTGACACTATGTCTGAGAGTATGAATGACCAAGAAGAGTTTATATCTTCGTGTTC
CTTGCCTGTATCTCCCCTTGGTTCAATAGCTACCAGATTTTTGGAAGAGGAGGAACTGAGGTCTCATCAC
ATTCTAGAGCGCTTGGATGCCCATATTGAAGAACTAAAAAGAGAGAGTGAAAAGACAGTGAGACAATTCA
CAGCCTTAAAGTAG

Translation (657 aa):
MEALLEGIQNRGHGGGFLTSCEAELQELMKQIDIMVAHKKSEWEGRTHALETCLKIREQELKSLRSQLDV
THKEVGMLHQQVEEHEKIKQEMTMEYKQELKKLHEELCILKRSYEKLQKKQMREFRGNTKNHREDRSEIE
RLTAKIEEFRQKSLDWEKQRLIYQQQVSSLEAQRKALAEQSEIIQAQLVNRKQKLESVELSSQSEIQHLS
SKLERANDTICANELEIERLTMRVNDLVGTSMTVLQEQQQKEEKLRESEKLLEALQEEKRELKAALQSQE
NLIHEARIQKEKLQEKVKATNTQHAVEAISLESVSATCKQLSQELMEKYEELKRMEAHNNEYKAEIKKLK
EQILQGEQSYSSALEGMKMEISHLTQELHQRDITIASTKGSSSDMEKRLRAEMQKAEDKAVEHKEILDQL
ESLKLENRHLSEMVMKLELGLHEAKEISLADLQENYIEALNKLVSENQQLQKDLMNTKSQLEISTQMCKK
QNDRIFKPTHSRTTEFKNTEFKPTHGQHRHDGIKTEHYKTDLHSPRGQASDSINPMSRVLSPLSPQISPC
SSTRSLTSYSLCKTHSLPSALDTNEANFSDTMSESMNDQEEFISSCSLPVSPLGSIATRFLEEEELRSHH
ILERLDAHIEELKRESEKTVRQFTALK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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