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Report for CCDS93331.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93331.1 Public Homo sapiens 3 FILIP1L 24 110 108 CCDS HistoryNCBI Gene:11259Re-query CCDS DB by CCDS ID:93331.1Re-query CCDS DB by GeneID:11259See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 93331.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000477258.2 ENSP00000417617.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000477258.2Link to Ensembl Protein Viewer:ENSP00000417617.2Re-query CCDS DB by Nucleotide ID:ENST00000477258Re-query CCDS DB by Protein ID:ENSP00000417617
Original member Current member NCBI NM_001387850.1 NP_001374779.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001387850.1Link to Protein Sequence:NP_001374779.1Re-query CCDS DB by Nucleotide ID:NM_001387850Re-query CCDS DB by Protein ID:NP_001374779Link to BLAST:NP_001374779.1

Chromosomal Locations for CCDS 93331.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 99830414 99830605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 99848295 99851070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 99924230 99924408 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 99929856 99930029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 99930769 99931020 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3573 nt):
ATGCGTTCCAGAGGCAGTGATACCGAGGGCTCAGCCCAAAAGAAATTTCCAAGACATACTAAAGGCCACA
GTTTCCAAGGGCCTAAAAACATGAAGCATAGACAGCAAGACAAAGACTCCCCCAGTGAGTCGGATGTAAT
ACTTCCGTGTCCCAAGGCAGAGAAGCCACACAGTGGTAATGGCCACCAAGCAGAAGACCTCTCAAGAGAT
GACCTGTTATTTCTCCTCAGCATTCTGGAGGGAGAACTGCAGGCTCGAGATGAGGTCATAGGCATTTTAA
AGGCTGAAAAAATGGACCTGGCTTTGCTGGAAGCTCAGTATGGGTTTGTCACTCCAAAAAAGGTGTTAGA
GGCTCTCCAGAGAGATGCTTTTCAAGCGAAATCTACCCCTTGGCAGGAGGACATCTATGAGAAACCAATG
AATGAGTTGGACAAAGTTGTGGAAAAACATAAAGAATCTTACAGACGAATCCTGGGACAGCTTTTAGTGG
CAGAAAAATCCCGTAGGCAAACCATATTGGAGTTGGAGGAAGAAAAGAGAAAACATAAAGAATACATGGA
GAAGAGTGATGAATTCATATGCCTACTAGAACAGGAATGTGAAAGATTAAAGAAGCTAATTGATCAAGAA
ATCAAGTCTCAGGAGGAGAAGGAGCAAGAAAAGGAGAAAAGGGTCACCACCCTGAAAGAGGAGCTGACCA
AGCTGAAGTCTTTTGCTTTGATGGTGGTGGATGAACAGCAAAGGCTGACGGCACAGCTCACCCTTCAAAG
ACAGAAAATCCAAGAGCTGACCACAAATGCAAAGGAAACACATACCAAACTAGCCCTTGCTGAAGCCAGA
GTTCAGGAGGAAGAGCAGAAGGCAACCAGACTAGAGAAGGAACTGCAAACGCAGACCACAAAGTTTCACC
AAGACCAAGACACAATTATGGCGAAGCTCACCAATGAGGACAGTCAAAATCGCCAGCTTCAACAAAAGCT
GGCAGCACTCAGCCGGCAGATTGATGAGTTAGAAGAGACAAACAGGTCTTTACGAAAAGCAGAAGAGGAG
CTGCAAGATATAAAAGAAAAAATCAGTAAGGGAGAATATGGAAACGCTGGTATCATGGCTGAAGTGGAAG
AGCTCAGGAAACGTGTGCTAGATATGGAAGGGAAAGATGAAGAGCTCATAAAAATGGAGGAGCAGTGCAG
AGATCTCAATAAGAGGCTTGAAAGGGAGACGTTACAGAGTAAAGACTTTAAACTAGAGGTTGAAAAACTC
AGTAAAAGAATTATGGCTCTGGAAAAGTTAGAAGACGCTTTCAACAAAAGCAAACAAGAATGCTACTCTC
TGAAATGCAATTTAGAAAAAGAAAGGATGACCACAAAGCAGTTGTCTCAAGAACTGGAGAGTTTAAAAGT
AAGGATCAAAGAGCTAGAAGCCATTGAAAGTCGGCTAGAAAAGACAGAATTCACTCTAAAAGAGGATTTA
ACTAAACTGAAAACATTAACTGTGATGTTTGTAGATGAACGGAAAACAATGAGTGAAAAATTAAAGAAAA
CTGAAGATAAATTACAAGCTGCTTCTTCTCAGCTTCAAGTGGAGCAAAATAAAGTAACAACAGTTACTGA
GAAGTTAATTGAGGAAACTAAAAGGGCGCTCAAGTCCAAAACCGATGTAGAAGAAAAGATGTACAGCGTA
ACCAAGGAGAGAGATGATTTAAAAAACAAATTGAAAGCGGAAGAAGAGAAAGGAAATGATCTCCTGTCAA
GAGTTAATATGTTGAAAAATAGGCTTCAATCATTGGAAGCAATTGAGAAAGATTTCCTAAAAAACAAATT
AAATCAAGACTCTGGGAAATCCACAACAGCATTACACCAAGAAAACAATAAGATTAAGGAGCTCTCTCAA
GAAGTGGAAAGACTGAAACTGAAGCTAAAGGACATGAAAGCCATTGAGGATGACCTCATGAAAACAGAAG
ATGAATATGAGACTCTAGAACGAAGGTATGCTAATGAACGAGACAAAGCTCAATTTTTATCTAAAGAGCT
AGAACATGTTAAAATGGAACTTGCTAAGTACAAGTTAGCAGAAAAGACAGAGACCAGCCATGAACAATGG
CTTTTCAAAAGGCTTCAAGAAGAAGAAGCTAAGTCAGGGCACCTCTCAAGAGAAGTGGATGCATTAAAAG
AGAAAATTCATGAATACATGGCAACTGAAGACCTAATATGTCACCTCCAGGGAGATCACTCAGTCCTGCA
AAAAAAACTAAATCAACAAGAAAACAGGAACAGAGATTTAGGAAGAGAGATTGAAAACCTCACTAAGGAG
TTAGAGAGGTACCGGCATTTCAGTAAGAGCCTCAGGCCTAGTCTCAATGGAAGAAGAATTTCCGATCCTC
AAGTATTTTCTAAAGAAGTTCAGACAGAAGCAGTAGACAATGAACCACCTGATTACAAGAGCCTCATTCC
TCTGGAACGTGCAGTCATCAATGGTCAGTTATATGAGGAGAGTGAGAATCAAGACGAGGACCCTAATGAT
GAGGGATCTGTGCTGTCCTTCAAATGCAGCCAGTCTACTCCATGTCCTGTTAACAGAAAGCTATGGATTC
CCTGGATGAAATCCAAGGAGGGCCATCTTCAGAATGGAAAAATGCAAACTAAACCCAATGCCAACTTTGT
GCAACCTGGAGATCTAGTCCTAAGCCACACACCTGGGCAGCCACTTCATATAAAGGTTACTCCAGACCAT
GTACAAAACACAGCCACTCTTGAAATCACAAGTCCAACCACAGAGAGTCCTCACTCTTACACGAGTACTG
CAGTGATACCGAACTGTGGCACGCCAAAGCAAAGGATAACCATCCTCCAAAACGCCTCCATAACACCAGT
AAAGTCCAAAACCTCTACCGAAGACCTCATGAATTTAGAACAAGGCATGTCCCCAATTACCATGGCAACC
TTTGCCAGAGCACAGACCCCAGAGTCTTGTGGTTCTCTAACTCCAGAAAGGACAATGTCCCCTATTCAGG
TTTTGGCTGTGACTGGTTCAGCTAGCTCTCCTGAGCAGGGACGCTCCCCAGAACCAACAGAAATCAGTGC
CAAGCATGCGATATTCAGAGTCTCCCCAGACCGGCAGTCATCATGGCAGTTTCAGCGTTCAAACAGCAAT
AGCTCAAGTGTGATAACTACTGAGGATAATAAAATCCACATTCACTTAGGAAGTCCTTACATGCAAGCTG
TAGCCAGCCCTGTGAGACCTGCCAGCCCTTCAGCACCACTGCAGGATAACCGAACTCAAGGCTTAATTAA
CGGGGCACTAAACAAAACAACCAATAAAGTCACCAGCAGTATTACTATCACACCAACAGCCACACCTCTT
CCTCGACAATCACAAATTACAATCAAGGAGGTATGCAAGCAGAGAATCCCAGCACGGATCCCTAAACCGA
AATCTACAGGCATCACCAAGATTTCCACTAAAGCCCCCACAGTGCCTATGGATAAGCCTATTTACCAAAA
TGGCTGTGGGAAGCTACACATCGTGAGAACTGTCACCTCCAACACCTTCCTCCACGTGGGAGGGAGAAGG
TAA

Translation (1190 aa):
MRSRGSDTEGSAQKKFPRHTKGHSFQGPKNMKHRQQDKDSPSESDVILPCPKAEKPHSGNGHQAEDLSRD
DLLFLLSILEGELQARDEVIGILKAEKMDLALLEAQYGFVTPKKVLEALQRDAFQAKSTPWQEDIYEKPM
NELDKVVEKHKESYRRILGQLLVAEKSRRQTILELEEEKRKHKEYMEKSDEFICLLEQECERLKKLIDQE
IKSQEEKEQEKEKRVTTLKEELTKLKSFALMVVDEQQRLTAQLTLQRQKIQELTTNAKETHTKLALAEAR
VQEEEQKATRLEKELQTQTTKFHQDQDTIMAKLTNEDSQNRQLQQKLAALSRQIDELEETNRSLRKAEEE
LQDIKEKISKGEYGNAGIMAEVEELRKRVLDMEGKDEELIKMEEQCRDLNKRLERETLQSKDFKLEVEKL
SKRIMALEKLEDAFNKSKQECYSLKCNLEKERMTTKQLSQELESLKVRIKELEAIESRLEKTEFTLKEDL
TKLKTLTVMFVDERKTMSEKLKKTEDKLQAASSQLQVEQNKVTTVTEKLIEETKRALKSKTDVEEKMYSV
TKERDDLKNKLKAEEEKGNDLLSRVNMLKNRLQSLEAIEKDFLKNKLNQDSGKSTTALHQENNKIKELSQ
EVERLKLKLKDMKAIEDDLMKTEDEYETLERRYANERDKAQFLSKELEHVKMELAKYKLAEKTETSHEQW
LFKRLQEEEAKSGHLSREVDALKEKIHEYMATEDLICHLQGDHSVLQKKLNQQENRNRDLGREIENLTKE
LERYRHFSKSLRPSLNGRRISDPQVFSKEVQTEAVDNEPPDYKSLIPLERAVINGQLYEESENQDEDPND
EGSVLSFKCSQSTPCPVNRKLWIPWMKSKEGHLQNGKMQTKPNANFVQPGDLVLSHTPGQPLHIKVTPDH
VQNTATLEITSPTTESPHSYTSTAVIPNCGTPKQRITILQNASITPVKSKTSTEDLMNLEQGMSPITMAT
FARAQTPESCGSLTPERTMSPIQVLAVTGSASSPEQGRSPEPTEISAKHAIFRVSPDRQSSWQFQRSNSN
SSSVITTEDNKIHIHLGSPYMQAVASPVRPASPSAPLQDNRTQGLINGALNKTTNKVTSSITITPTATPL
PRQSQITIKEVCKQRIPARIPKPKSTGITKISTKAPTVPMDKPIYQNGCGKLHIVRTVTSNTFLHVGGRR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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