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Report for CCDS90334.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
90334.1 Public Mus musculus 7 Fbxl19 23 108 98 CCDS HistoryNCBI Gene:233902Re-query CCDS DB by CCDS ID:90334.1Re-query CCDS DB by GeneID:233902See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 90334.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000206893.1 ENSMUSP00000145616.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000206893.1Link to Ensembl Protein Viewer:ENSMUSP00000145616.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000206893Re-query CCDS DB by Protein ID:ENSMUSP00000145616
Current member NCBI NM_001374793.1 NP_001361722.1 Accepted alive Link to Nucleotide Sequence:NM_001374793.1Link to Protein Sequence:NP_001361722.1Re-query CCDS DB by Nucleotide ID:NM_001374793Re-query CCDS DB by Protein ID:NP_001361722Link to BLAST:NP_001361722.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001361722.1 631 Q6PB97-2 631 100% 0 0

Chromosomal Locations for CCDS 90334.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 127748274 127748450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127749710 127749853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127749981 127750067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127750148 127750366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127750865 127750897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127752010 127752521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127761252 127761415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127762440 127762601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127767445 127767663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127767752 127767930 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1896 nt):
ATGTCGTCGAGCAGCCGGGGACCGGGGGCCGGAGCGCGCCGACGCCGAACCCGCTGCCGTCGTTGCCGGG
CCTGTGTGCGAACTGAGTGCGGGGACTGCCATTTCTGCCGAGACATGAAGAAGTTCGGGGGGCCCGGGCG
CATGAAGCAGTCGTGCCTGCTTCGGCAGTGCACCGCGCCCGTGCTCCCACACACAGCTGTGTGCCTCTTG
TGCGGGGAGGCTGGAAAGGAGGATACAGTGGAGGGAGAAGACGAGAAGTTTAGTTTGAGCCTCATGGAGT
GTACAATCTGCAACGAGATCGTCCACCCTGGCTGCCTGAAGATGGGAAAGGCTGAGGGTGTTATCAATTC
CGAGATACCCAACTGCTGGGAGTGCCCCCGATGTACCCAGGAAGGACGGACAAGCAAGGATGCAGGTGAG
GGTCCAGGGCGCCGCAGGGCTGACAATGGTGAGGAAGGCGCTAACCTAGGGGGTGGATGGAAGCTGACAG
AGGAACCACCACCTCCACCACCCCTGCCCAGAAGAAAGGGACCCTTACCTGCTGGCCCTACCCCTGACGA
TGTGCCTGGGCCCCCCAAACGGAAGGAGAGGGAGGGGGGGAATGAGCCCCCCACCCCAAGGAAAAAGGTG
AAAGGAGGCCGAGAGAGGCACTTGAAGAAGAAACCAAAGCCACCTATAGCTTCTGCTGAGGGCCCGGCAG
TGCCATCTCCATCACCACAGAGGGAGAAACTGGAGCGTTTCAAGCGCATGTGCCAGCTGCTGGAGCGGGT
GCCCGATACCTCTTCTTCCTCCTCGGACTCGGACTCGGATTCAGACTCATCCGGCACATCACTCAGTGAG
GATGAAGCTCCTGGAGAGGCCCGGAATGGGCGGCGGCCAGCACGGGGCAGCTCCGGCGAGAAGGAGAACC
GTGGGGGACGGCGGGCTATACGCCCTGGCACTGGGGGGCCACTGCTCAGCTGGCCCCTGGGCCCTGCCCC
ACCACCACGGCCTCCACAGTTGGAGCGACATGTCGTGCGGCCCCCGCCTCGAAGCCCTGAGCCTGATACT
CTGCCTTTGGCTGCTGGATCCGACCACCCTCTGCCTCGGGCTGCCTGGCTTCGTGTTTTCCAGCACCTTG
GACCCCGTGAGCTATGTGTCTGCATGAGAGTTTGCCGGACTTGGAGCCGCTGGTGCTACGACAAGCGTCT
GTGGCCTAGGATGGACCTAAGCCGGAGAAAGTCACTGACCCCACCCATGCTTAGTGGGGTGGTTCGCCGC
CAGCCCCGTGCTCTGGACCTCAGCTGGACAGGTGTCTCCAAAAAGCAGCTCATGTGGCTCCTGAACCGAC
TGCAAGGCCTGCAGGAGTTGGTGCTTTCTGGGTGCTCCTGGCTCTCTGTCTCTGCCCTGGGCTCGGCCCC
ACTGCCAGCGCTGCGGCTCTTGGACCTCCGCTGGATTGAAGATGTTAAAGACTCCCAGCTTCGGGAGCTG
CTGCTGCCTCCACCAGACACCAAACCAGGGCAAACTGAGAGTCGAGGCCGACTGCAGGGGGTGGCAGAAC
TTCGCCTAGCTGGTCTGGAGCTCACAGATGCCTCCCTGAGGCTCCTGTTGCGCCACGCTCCCCAGCTCAG
TGCCCTGGACCTGAGTCACTGCGCCCACGTTGGGGACCCCAGTGTCCACCTCCTCACGGCTCCTACTTCC
CCTCTTCGAGAAACACTGGTGCACCTCAATCTCGCTGGGTGCCACCGCCTCACGGACCACTGCCTTCCAC
TGTTCCGTCGATGCCCACGTCTTCGCCGCCTGGACCTACGCTCCTGCCGCCAGCTCTCACCTGAAGCTTG
TGCCCGGTTGGCGGCTGCTGGGCCCCCTGGCCCCTTTCGCTGCCCAGAAGAGAAACTGCTTCTCAAGGAC
AGCTAG

Translation (631 aa):
MSSSSRGPGAGARRRRTRCRRCRACVRTECGDCHFCRDMKKFGGPGRMKQSCLLRQCTAPVLPHTAVCLL
CGEAGKEDTVEGEDEKFSLSLMECTICNEIVHPGCLKMGKAEGVINSEIPNCWECPRCTQEGRTSKDAGE
GPGRRRADNGEEGANLGGGWKLTEEPPPPPPLPRRKGPLPAGPTPDDVPGPPKRKEREGGNEPPTPRKKV
KGGRERHLKKKPKPPIASAEGPAVPSPSPQREKLERFKRMCQLLERVPDTSSSSSDSDSDSDSSGTSLSE
DEAPGEARNGRRPARGSSGEKENRGGRRAIRPGTGGPLLSWPLGPAPPPRPPQLERHVVRPPPRSPEPDT
LPLAAGSDHPLPRAAWLRVFQHLGPRELCVCMRVCRTWSRWCYDKRLWPRMDLSRRKSLTPPMLSGVVRR
QPRALDLSWTGVSKKQLMWLLNRLQGLQELVLSGCSWLSVSALGSAPLPALRLLDLRWIEDVKDSQLREL
LLPPPDTKPGQTESRGRLQGVAELRLAGLELTDASLRLLLRHAPQLSALDLSHCAHVGDPSVHLLTAPTS
PLRETLVHLNLAGCHRLTDHCLPLFRRCPRLRRLDLRSCRQLSPEACARLAAAGPPGPFRCPEEKLLLKD
S


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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