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Report for CCDS88193.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
88193.1 Public Mus musculus 11 Glod4 23 108 98 CCDS HistoryNCBI Gene:67201Re-query CCDS DB by CCDS ID:88193.1Re-query CCDS DB by GeneID:67201See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 88193.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000170710.7 ENSMUSP00000131788.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000170710.7Link to Ensembl Protein Viewer:ENSMUSP00000131788.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000170710Re-query CCDS DB by Protein ID:ENSMUSP00000131788
Original member Current member NCBI NM_001362901.1 NP_001349830.1 Accepted alive Link to Nucleotide Sequence:NM_001362901.1Link to Protein Sequence:NP_001349830.1Re-query CCDS DB by Nucleotide ID:NM_001362901Re-query CCDS DB by Protein ID:NP_001349830Link to BLAST:NP_001349830.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001349830.1 279 Q9CPV4-3 279 100% 0 0

Chromosomal Locations for CCDS 88193.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 76221966 76222031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 76233022 76233108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 76233202 76233315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 76233900 76233986 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 76234389 76234525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 76237669 76237813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 76239452 76239572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 76240873 76240922 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 76242994 76243026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (840 nt):
ATGATCTGTGGCTCTGTTCTAAACAGCCCAGATGTTCTCCGCCATGAGGAATTTGAAGAAGGCTGCAAAG
CTGCATGCAATGGGCCTTATGATGGGAAGTGGAGTAAAACAATGGTGGGATTTGGGCCCGAGGATGATCA
TTTTGTTGCAGAATTGACATACAATTATGGCATCGGAGACTACAAGCTTGGCAATGACTTCATGGGAATC
ACGCTTGCTTCTAGCCAAGCTGTCAGCAATGCCAGGAAGCTGGAGTGGCCACTGAGTAAAGTTGCAGAAG
GGATTTTTGAAACTGAAGCCCCAGGAGGATATAAGTTCTACTTACAGGATAGAAGCCCATCTCAGTCAGA
TCCTGTATTAAAGGTGACTCTAGCAGTGTCTGATCTCCAGAAGTCCTTGAACTACTGGTCTAATCTCCTG
GGAATGAAAATTTATGAGCAAGATGAGGAAAAGCAACGAGCTTTGCTGGGCTACGCTGATAACCAGTGTA
AGCTAGAGCTACAGGGCATCCAGGGTGCAGTTGATCATGCAGCGGCCTTTGGAAGAATTGCCTTTTCTTG
TCCTCAGAAAGAGTTGCCAGACTTAGAAGACTTGATGAAAAGGGAGAGCCACTCGATCCTGACTCCGTTG
GTGAGTCTGGACACCCCAGGGAAAGCCACAGTGCAAGTGGTCATCCTGGCTGACCCTGATGGACATGAAA
TTTGCTTTGTTGGGGATGAAGCTTTTCGAGAACTCTCTAAGATGGATCCAAAAGGAAGCAAATTATTGGA
TGATGCAATGGAAGCAGACAAAAGTGACGAGTGGTTTGCTACGAGGAATAAACCAAAGGCTTCGGGTTAG

Translation (279 aa):
MICGSVLNSPDVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGIGDYKLGNDFMGI
TLASSQAVSNARKLEWPLSKVAEGIFETEAPGGYKFYLQDRSPSQSDPVLKVTLAVSDLQKSLNYWSNLL
GMKIYEQDEEKQRALLGYADNQCKLELQGIQGAVDHAAAFGRIAFSCPQKELPDLEDLMKRESHSILTPL
VSLDTPGKATVQVVILADPDGHEICFVGDEAFRELSKMDPKGSKLLDDAMEADKSDEWFATRNKPKASG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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