CCDS Home FTP Process Releases & Statistics
Collaborators EBI HGNC MGI NCBI
Contact Us email CCDS
Genome Displays Related Resources Gene HomoloGene MANE RefSeq
|
|
Report for CCDS86675.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
86675.1 |
Public |
Homo sapiens |
18 |
RELCH |
24 |
110 |
108 |
|
Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 86675.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
|
|
EBI |
ENST00000256858.10 |
ENSP00000256858.5 |
|
Accepted |
alive |
|
|
|
NCBI |
NM_001346229.2 |
NP_001333158.1 |
|
Accepted |
alive |
|
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_001333158.1 |
1250 |
Q9P260-2 |
1250 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 86675.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (3753 nt): ATGGCGGCGATGGCGCCTGGAGGTAGTGGCAGTGGTGGCGGCGTGAATCCATTTCTCAGTGATTCGGATG AGGACGATGACGAGGTAGCTGCAACAGAGGAACGGCGGGCAGTACTTCGGCTGGGCGCCGGAAGTGGCCT AGATCCTGGCTCTGCGGGCTCGCTGTCGCCACAGGATCCCGTGGCCTTAGGAAGCAGTGCGCGGCCAGGG CTCCCTGGGGAGGCGTCGGCGGCTGCAGTGGCCCTGGGGGGCACCGGGGAGACCCCGGCCCGATTATCAA TTGATGCGATCGCTGCTCAGCTGTTGCGCGATCAATACTTGCTGACCGCCCTGGAGCTGCATACCGAGCT GTTAGAGAGTGGCCGGGAGCTGCCTCGGCTGCGCGACTACTTCTCCAATCCAGGCAACTTCGAGAGGCAA AGTGGAACCCCGCCGGGGATGGGGGCGCCAGGGGTCCCTGGAGCAGCCGGCGTTGGGGGCGCTGGAGGTC GGGAACCGAGTACAGCGTCGGGCGGGGGACAGCTCAATCGAGCTGGGAGCATTAGTACCCTTGATTCTTT AGACTTTGCAAGATATTCAGATGATGGTAACAGGGAAACAGATGAAAAAGTGGCAGTCCTGGAGTTTGAA CTACGGAAAGCCAAGGAGACCATTCAGGCCCTCCGAGCCAACCTGACAAAGGCCGCAGAACATGAAGTTC CTTTACAGGAACGAAAAAATTACAAATCAAGTCCTGAAATTCAGGAGCCAATCAAACCTCTTGAAAAGAG AGCTCTAAACTTCTTAGTCAATGAATTTTTATTGAAGAATAACTATAAGCTTACATCAATAACCTTTTCA GATGAAAACGATGATCAGGATTTTGAATTATGGGATGATGTAGGATTAAACATTCCAAAACCTCCAGACT TATTGCAACTCTACCGGGATTTTGGAAATCATCAAGTAACTGGAAAAGATCTTGTAGATGTGGCCAGTGG AGTAGAAGAAGATGAATTAGAGGCCCTTACACCAATTATAAGCAACCTTCCTCCAACTCTTGAAACTCCC CAGCCTGCAGAGAACTCCATGTTAGTACAGAAATTAGAAGATAAAATTAGTTTGTTAAATAGTGAGAAAT GGTCATTGATGGAGCAAATCAGAAGACTTAAAAGTGAAATGGACTTCCTCAAAAATGAACACTTTGCCAT CCCAGCAGTTTGTGACTCTGTTCAGCCTCCTTTGGATCAGTTGCCCCACAAAGACTCTGAGGACAGTGGA CAGCATCCAGATGTAAATAGTTCAGACAAGGGAAAAAACACAGACATCCATCTTTCAATATCAGATGAAG CTGATTCCACTATTCCTAAAGAGAATTCCCCAAATTCATTCCCCAGGAGAGAAAGAGAAGGAATGCCACC TTCTTCTCTATCAAGTAAAAAGACAGTTCATTTTGATAAACCTAATAGGAAATTGTCTCCTGCATTCCAT CAAGCACTACTCTCTTTTTGTCGAATGTCAGCAGATAGTCGTTTAGGATACGAGGTGTCTCGTATTGCAG ACAGTGAAAAAAGCGTTATGTTAATGCTGGGACGCTGCCTGCCACACATTGTTCCCAATGTGCTATTGGC AAAGAGAGAGGAGTTGATCCCCCTCATATTGTGTACAGCATGTCTACATCCTGAGCCTAAAGAGCGAGAT CAGCTTCTCCACATACTTTTCAATTTGATCAAGAGGCCAGATGATGAGCAAAGGCAAATGATACTGACAG GTTGTGTGGCATTTGCGCGTCATGTTGGACCAACACGTGTAGAAGCTGAACTTTTACCACAGTGTTGGGA ACAGATTAATCACAAATACCCAGAAAGACGACTGCTTGTGGCAGAATCCTGTGGAGCACTGGCACCTTAC CTTCCTAAAGAAATCCGTAGCTCCTTGGTTCTTTCAATGTTGCAACAAATGTTAATGGAAGATAAGGCAG ATTTGGTAAGAGAAGCTGTTATCAAAAGCCTTGGTATCATTATGGGATACATTGATGATCCAGACAAATA TCATCAGGGTTTTGAATTGTTGCTGTCAGCCTTGGGTGATCCCTCAGAAAGAGTAGTTAGTGCTACACAT CAAGTATTTTTACCAGCTTACGCTGCGTGGACTACAGAACTTGGAAATTTACAGTCTCATCTTATACTTA CACTACTGAACAAGATTGAAAAACTTCTCAGGGAAGGAGAACATGGACTGGATGAACACAAACTCCACAT GTATCTTTCTGCCTTGCAGTCCTTGATCCCATCTCTCTTTGCATTAGTGCTACAGAATGCACCTTTCTCC AGCAAAGCCAAGCTTCATGGTGAAGTGCCACAGATAGAAGTGACTAGGTTTCCTCGGCCTATGTCGCCTC TTCAAGATGTGTCCACTATTATCGGAAGTCGTGAGCAATTGGCAGTGCTGCTGCAACTTTATGACTACCA GCTAGAACAAGAGGGTACAACAGGCTGGGAGAGTTTACTGTGGGTTGTCAATCAATTGTTGCCACAACTT ATAGAAATAGTTGGCAAAATTAATGTTACTTCAACTGCCTGTGTCCATGAATTCTCCAGATTTTTCTGGC GCCTTTGCCGGACATTTGGCAAAATTTTTACAAACACTAAGGTAAAACCTCAGTTCCAGGAGATTTTAAG ACTATCTGAAGAAAACATTGATTCCTCAGCAGGAAATGGGGTCCTCACTAAAGCTACAGTCCCCATTTAT GCAACAGGAGTCCTTACGTGTTATATTCAGATAAAGGAGTATTTGCATATACATAATGAGATATCTTGGG AATGGGACCCAAGTCTAAACACAAAATGTGTTTCATATACACATTATACACATAGCCTGAAGGAAGAAGA CCGAAAACTGTTAGTTGGATTCTTAGAAGATGTAATGACGCTGCTTTCATTATCTCATGCTCCTCTTGAT AGCCTGAAGGCTTCTTTTGTGGAATTGGGTGCAAACCCAGCCTACCATGAGTTACTATTAACTGTTTTGT GGTATGGTGTTGTCCATACTTCAGCACTCGTGAGGTGTACTGCTGCTAGAATGTTTGAGCTGTTGGTGAA GGGGGTGAATGAAACTCTGGTAGCTCAGAGGGTTGTTCCTGCTCTCATTACTCTCTCCAGTGACCCTGAA ATCTCTGTCAGGATTGCCACAATTCCAGCCTTTGGCACTATTATGGAAACAGTAATTCAAAGAGAGTTGC TGGAAAGAGTGAAAATGCAGTTGGCTTCTTTCCTGGAAGATCCTCAGTATCAAGACCAACATTCTTTGCA TACAGAGATCATAAAAACATTTGGTAGAGTTGGCCCTAACGCAGAACCCAGGTTCCGAGATGAGTTTGTT ATACCACATTTGCATAAGTTAGCCTTGGTGAACAACTTACAGATTGTGGATTCTAAAAGACTGGACATTG CTACGCATCTTTTTGAAGCCTACAGTGCACTTTCCTGTTGTTTCATTTCAGAGGATTTAATGGTTAATCA CTTTTTACCTGGTCTCAGATGTTTACGGACTGACATGGAACATCTCTCTCCAGAGCATGAGGTTATTTTA AGTTCCATGATAAAAGAATGTGAACAAAAAGTTGAAAACAAGACCGTCCAAGAGCCTCAAGGCTCAATGT CAATTGCTGCAAGCTTAGTGAGTGAAGATACAAAGACCAAGTTTTTGAACAAAATGGGCCAGTTGACAAC ATCAGGTGCCATGTTGGCCAATGTATTTCAGAGAAAGAAGTAG
Translation (1250 aa): MAAMAPGGSGSGGGVNPFLSDSDEDDDEVAATEERRAVLRLGAGSGLDPGSAGSLSPQDPVALGSSARPG LPGEASAAAVALGGTGETPARLSIDAIAAQLLRDQYLLTALELHTELLESGRELPRLRDYFSNPGNFERQ SGTPPGMGAPGVPGAAGVGGAGGREPSTASGGGQLNRAGSISTLDSLDFARYSDDGNRETDEKVAVLEFE LRKAKETIQALRANLTKAAEHEVPLQERKNYKSSPEIQEPIKPLEKRALNFLVNEFLLKNNYKLTSITFS DENDDQDFELWDDVGLNIPKPPDLLQLYRDFGNHQVTGKDLVDVASGVEEDELEALTPIISNLPPTLETP QPAENSMLVQKLEDKISLLNSEKWSLMEQIRRLKSEMDFLKNEHFAIPAVCDSVQPPLDQLPHKDSEDSG QHPDVNSSDKGKNTDIHLSISDEADSTIPKENSPNSFPRREREGMPPSSLSSKKTVHFDKPNRKLSPAFH QALLSFCRMSADSRLGYEVSRIADSEKSVMLMLGRCLPHIVPNVLLAKREELIPLILCTACLHPEPKERD QLLHILFNLIKRPDDEQRQMILTGCVAFARHVGPTRVEAELLPQCWEQINHKYPERRLLVAESCGALAPY LPKEIRSSLVLSMLQQMLMEDKADLVREAVIKSLGIIMGYIDDPDKYHQGFELLLSALGDPSERVVSATH QVFLPAYAAWTTELGNLQSHLILTLLNKIEKLLREGEHGLDEHKLHMYLSALQSLIPSLFALVLQNAPFS SKAKLHGEVPQIEVTRFPRPMSPLQDVSTIIGSREQLAVLLQLYDYQLEQEGTTGWESLLWVVNQLLPQL IEIVGKINVTSTACVHEFSRFFWRLCRTFGKIFTNTKVKPQFQEILRLSEENIDSSAGNGVLTKATVPIY ATGVLTCYIQIKEYLHIHNEISWEWDPSLNTKCVSYTHYTHSLKEEDRKLLVGFLEDVMTLLSLSHAPLD SLKASFVELGANPAYHELLLTVLWYGVVHTSALVRCTAARMFELLVKGVNETLVAQRVVPALITLSSDPE ISVRIATIPAFGTIMETVIQRELLERVKMQLASFLEDPQYQDQHSLHTEIIKTFGRVGPNAEPRFRDEFV IPHLHKLALVNNLQIVDSKRLDIATHLFEAYSALSCCFISEDLMVNHFLPGLRCLRTDMEHLSPEHEVIL SSMIKECEQKVENKTVQEPQGSMSIAASLVSEDTKTKFLNKMGQLTTSGAMLANVFQRKK
|