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Report for CCDS85351.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
85351.1 Public Mus musculus 7 Pde2a 23 108 98 CCDS HistoryNCBI Gene:207728Re-query CCDS DB by CCDS ID:85351.1Re-query CCDS DB by GeneID:207728See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 85351.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000209537.1 ENSMUSP00000147553.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000209537.1Link to Ensembl Protein Viewer:ENSMUSP00000147553.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000209537Re-query CCDS DB by Protein ID:ENSMUSP00000147553
Original member NCBI NM_001243758.1 NP_001230687.1 Updated not alive Link to Nucleotide Sequence:NM_001243758.1Link to Protein Sequence:NP_001230687.1Re-query CCDS DB by Nucleotide ID:NM_001243758Re-query CCDS DB by Protein ID:NP_001230687
Current member NCBI NM_001243758.2 NP_001230687.1 Accepted alive Link to Nucleotide Sequence:NM_001243758.2Link to Protein Sequence:NP_001230687.1Re-query CCDS DB by Nucleotide ID:NM_001243758Re-query CCDS DB by Protein ID:NP_001230687Link to BLAST:NP_001230687.1

Chromosomal Locations for CCDS 85351.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 101450628 101450728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101451402 101451468 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101481371 101481460 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101484542 101484630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101494571 101494680 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101495637 101495692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101500388 101500447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101500977 101501118 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101501610 101501662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101501854 101501928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101502014 101502055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101502534 101502602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101502812 101502942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101503299 101503410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101503824 101503863 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101503972 101504035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101504378 101504450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101504571 101504748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101504957 101505069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101505919 101505996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101507096 101507218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101507677 101507747 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101508007 101508129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101508442 101508529 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101508692 101508739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101509717 101509791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101509935 101510034 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101510306 101510418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101510929 101510967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101511114 101511220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101511456 101511663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2838 nt):
ATGGCCCTGGGGCTTGCACCCTTTTCAGCCTCCTGGGACGCCGATGAAGGCCTATCTGGTAGCCTTAGGA
ACCCAGTGCTCTCACCCCACATTTGGGAACGGCGGGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCGCC
GCCGCAGCCATGCGCCGACAGCCTGCAGGATGCTTTGCTGAGCCTAGGCGCCGTTATCGACATTGCTGGC
CTGCGACAGGCTGCCAGGGATGCCCTCTCAGCCGTGCTCCCCAAAGTGGAGACTGTCTACACCTACCTGC
TAGATGGGGAGTCCAGACTGGTGTGTGAGGACCCCCCTCATGAGCTGCCACAGGAAGGAAAAATTCGAGA
AGCTGTGATCTCTCAGAAGCGGCTGAGTTGCAATGGGCTGGGACCTTCGGACCTACTGGGAAAGCCCTTG
GCCAGGCTGGTGGCTCCACTGGCTCCTGACATGCAAGTGCTGGTCATACCCCTGCTGGACAAGGAGACTG
GAAGTGTGGCAGCTGTCATCTTGGTGCACTGTGGCCAGCTGAGTGACAGTGAGGAACAGAGCTTGCAGGT
GGTAGAGAAGCACGCTCTGGTAGCCCTGCGGAGGGTGCAGGCCCTGCAGCAGCGCAGGCCTGAAGCTGTT
CAGAACACGTCAGTGGATGCCTCTGAAGATCAAAAGGATGAGAAGGGGTACACCGACCATGACCGAAAGA
TCCTGCAACTGTGTGGGGAACTCTTTGACTTGGATGCTACTTCTCTGCAGCTCAAAGTCCTTCAATATCT
GCAGCAGGAGACACAGGCCACTCACTGCTGCCTCCTGCTGGTGTCGGAGGACAATCTACAGCTTTCCTGC
AAGGTCATTGGAGACAAAGTGCTGGGAGAAGAGGTCAGCTTTCCATTGACCATGGGACGTCTGGGGCAGG
TGGTGGAAGACAAGCAGTGTATCCAGTTGAAGGACCTAACCTCTGACGATGTGCAACAGCTGCAAAACAT
GTTGGGTTGTGAGCTGCAGGCTATGCTGTGTGTCCCTGTCATCAGCCGAGCCACTGACCAGGTGGTGGCC
CTGGCTTGCGCCTTCAACAAGCTTGGAGGAGATTTCTTCACAGATGAGGATGAACACGTGATCCAACACT
GCTTCCACTACACAGGCACGGTGCTCACCAGCACCTTGGCCTTCCAGAAGGAGCAGAAGCTCAAGTGTGA
GTGCCAGGCTCTTCTCCAAGTGGCAAAGAACCTCTTCACCCACCTGGATGATGTCTCTGTCCTGCTACAG
GAGATCATCACGGAAGCCAGAAACCTCAGCAACGCAGAGATCTGCTCGGTGTTCCTGCTGGATCAGAACG
AGCTGGTGGCCAAGGTGTTCGATGGTGGCGTTGTGGACGATGAGAGTTATGAGATCCGCATCCCGGCGGA
CCAAGGCATCGCGGGCCACGTGGCGACTACGGGCCAGATCCTGAACATCCCAGATGCATATGCCCATCCG
CTTTTCTATCGCGGCGTAGATGACAGCACTGGCTTCCGCACGCGCAACATTCTCTGCTTCCCTATCAAGA
ACGAGAACCAGGAGGTCATTGGTGTGGCTGAGCTAGTGAACAAGATCAATGGGCCATGGTTCAGCAAGTT
TGATGAGGACCTGGCCACAGCCTTCTCCATCTACTGTGGCATCAGCATCGCCCACTCTCTCCTATACAAA
AAGGTGAATGAAGCCCAATACCGCAGCCACCTGGCCAATGAGATGATGATGTATCATATGAAGGTCTCTG
ATGATGAATACACCAAGCTTCTCCACGATGGCATCCAACCTGTGGCCGCCATTGACTCCAACTTTGCCAA
CTTTACCTACACGCCTCGGTCTCTGCCTGAGGACGACACTTCTATGGCCATCCTGAGCATGCTGCAAGAC
ATGAACTTCATCAATAACTACAAAATTGACTGCCCAACTCTGGCCCGATTCTGCCTGATGGTGAAGAAAG
GCTACCGGGATCCACCCTACCACAACTGGATGCACGCCTTCTCTGTCTCTCATTTTTGCTACCTGCTCTA
CAAGAATCTGGAGCTCTCCAACTACCTCGAGGACATCGAGATCTTTGCATTGTTTATTTCCTGCATGTGT
CATGACCTGGACCACAGAGGCACAAACAACTCCTTCCAGGTGGCCTCGAAATCTGTGCTGGCCGCACTCT
ACAGCTCAGAGGGCTCTGTCATGGAGAGGCACCACTTTGCTCAAGCCATTGCTATCCTCAACACCCACGG
CTGCAATATCTTTGACCACTTCTCTCGGAAGGACTATCAGCGCATGCTGGACCTGATGAGGGACATCATC
TTGGCTACAGACCTGGCACACCACCTCCGCATCTTCAAGGACCTGCAGAAGATGGCTGAAGTGGGTTATG
ACCGAAACAACAGGCAACACCACAGGCTTCTTCTGTGCCTCCTCATGACCTCCTGTGACCTCTCTGACCA
GACAAAGGGCTGGAAGACCACCAGAAAGATTGCAGAGCTGATCTACAAAGAGTTCTTCTCCCAGGGAGAC
TTGGAGAAGGCCATGGGCAACCGACCGATGGAGATGATGGACCGTGAGAAGGCCTACATCCCTGAGCTTC
AGATCAGCTTTATGGAGCACATTGCCATGCCTATCTACAAGCTTTTACAAGACCTGTTCCCCAAGGCGGC
AGAGCTGTATGAACGTGTGGCCTCCAACCGTGAGCACTGGACCAAGGTGTCCCACAAGTTCACCATCCGA
GGCCTCCCCAGTAACAACTCGCTGGATTTCCTGGACGAGGAATACGAGGTCCCCGATTTGGACGGCACCA
GAGCTCCTGTCAATGGCTGCTGCAGCCTCGAGGGCTGA

Translation (945 aa):
MALGLAPFSASWDADEGLSGSLRNPVLSPHIWERRGQQVFLKPDEPPPQPCADSLQDALLSLGAVIDIAG
LRQAARDALSAVLPKVETVYTYLLDGESRLVCEDPPHELPQEGKIREAVISQKRLSCNGLGPSDLLGKPL
ARLVAPLAPDMQVLVIPLLDKETGSVAAVILVHCGQLSDSEEQSLQVVEKHALVALRRVQALQQRRPEAV
QNTSVDASEDQKDEKGYTDHDRKILQLCGELFDLDATSLQLKVLQYLQQETQATHCCLLLVSEDNLQLSC
KVIGDKVLGEEVSFPLTMGRLGQVVEDKQCIQLKDLTSDDVQQLQNMLGCELQAMLCVPVISRATDQVVA
LACAFNKLGGDFFTDEDEHVIQHCFHYTGTVLTSTLAFQKEQKLKCECQALLQVAKNLFTHLDDVSVLLQ
EIITEARNLSNAEICSVFLLDQNELVAKVFDGGVVDDESYEIRIPADQGIAGHVATTGQILNIPDAYAHP
LFYRGVDDSTGFRTRNILCFPIKNENQEVIGVAELVNKINGPWFSKFDEDLATAFSIYCGISIAHSLLYK
KVNEAQYRSHLANEMMMYHMKVSDDEYTKLLHDGIQPVAAIDSNFANFTYTPRSLPEDDTSMAILSMLQD
MNFINNYKIDCPTLARFCLMVKKGYRDPPYHNWMHAFSVSHFCYLLYKNLELSNYLEDIEIFALFISCMC
HDLDHRGTNNSFQVASKSVLAALYSSEGSVMERHHFAQAIAILNTHGCNIFDHFSRKDYQRMLDLMRDII
LATDLAHHLRIFKDLQKMAEVGYDRNNRQHHRLLLCLLMTSCDLSDQTKGWKTTRKIAELIYKEFFSQGD
LEKAMGNRPMEMMDREKAYIPELQISFMEHIAMPIYKLLQDLFPKAAELYERVASNREHWTKVSHKFTIR
GLPSNNSLDFLDEEYEVPDLDGTRAPVNGCCSLEG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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