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Report for CCDS82286.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82286.1 Public Homo sapiens 19 ZNF561 24 110 108 CCDS HistoryNCBI Gene:93134Re-query CCDS DB by CCDS ID:82286.1Re-query CCDS DB by GeneID:93134See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82286.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000424629.5 ENSP00000393074.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000424629.5Link to Ensembl Protein Viewer:ENSP00000393074.1Re-query CCDS DB by Nucleotide ID:ENST00000424629Re-query CCDS DB by Protein ID:ENSP00000393074
Original member Current member NCBI NM_001330365.2 NP_001317294.1 Accepted alive Link to Nucleotide Sequence:NM_001330365.2Link to Protein Sequence:NP_001317294.1Re-query CCDS DB by Nucleotide ID:NM_001330365Re-query CCDS DB by Protein ID:NP_001317294Link to BLAST:NP_001317294.1

Chromosomal Locations for CCDS 82286.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 9610200 9611336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 9614021 9614103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 9617045 9617078 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1254 nt):
ATGCTGGAGAACTACATGAACCTGGCCTCTGTGGAATGGGAAATACAACCTAGAACCAAACGGTCATCAC
TTCAGCAGGGTTTTTTGAAGAATCAAATATTCAGTGGGATACAAATGACAAGAGGCTACAGTGGATGGAA
ACTCTGTGACTGTAAGAATTGTGGAGAGGTCTTCAGGGAACAGTTTTGCCTTAAGACACACATGAGAGTT
CAGAATGGAGGGAATACTTCTGAGGGTAATTGTTATGGAAAAGACACCCTCAGTGTGCACAAGGAAGCCT
CTACTGGACAGGAACTTTCCAAATTTAATCCATGTGGAAAAGTCTTTACTCTAACTCCAGGTCTTGCTGT
ACATCTTGAAGTTCTCAATGCAAGACAACCCTACAAATGTAAGGAATGTGGAAAAGGCTTTAAGTATTTT
GCAAGCCTTGATAATCATATGGGAATCCACACTGATGAGAAACTCTGTGAATTTCAGGAATATGGGAGAG
CTGTCACAGCTTCTTCACACCTAAAGCAGTGTGTAGCAGTTCATACAGGAAAGAAATCCAAAAAGACTAA
GAAATGTGGGAAATCCTTCACTAATTTTTCTCAACTTTATGCACCTGTGAAAACTCATAAAGGAGAGAAG
TCCTTTGAATGTAAAGAATGTGGAAGATCCTTTAGAAATTCCTCATGCCTTAATGATCACATTCAAATTC
ACACTGGAATAAAACCACACAAGTGTACTTACTGTGGGAAAGCCTTCACTAGATCAACTCAACTTACTGA
ACATGTAAGAACTCACACTGGAATAAAACCCTATGAATGTAAGGAATGTGGCCAAGCCTTTGCTCAGTAC
TCGGGCCTTTCTATACACATACGAAGTCACAGTGGAAAGAAACCCTATCAGTGTAAGGAATGTGGGAAAG
CCTTCACTACATCCACAAGTCTTATTCAGCATACAAGAATTCACACAGGAGAGAAGCCTTATGAATGTGT
TGAATGTGGGAAGACCTTCATTACTTCTTCCCGTCGTAGTAAACATTTGAAAACTCATAGTGGAGAAAAG
CCCTTTGTATGCAAGATATGTGGGAAAGCATTTCTATATTCCTCACGCCTTAATGTTCACCTGCGAACTC
ATACCGGAGAGAAACCCTTCGTATGTAAAGAATGTGGGAAAGCATTTGCTGTTTCCTCACGCCTAAGTAG
ACATGAAAGAATTCACACTGGGGAGAAACCCTATGAATGCAAGGATATGAGTGTTACCATTTAG

Translation (417 aa):
MLENYMNLASVEWEIQPRTKRSSLQQGFLKNQIFSGIQMTRGYSGWKLCDCKNCGEVFREQFCLKTHMRV
QNGGNTSEGNCYGKDTLSVHKEASTGQELSKFNPCGKVFTLTPGLAVHLEVLNARQPYKCKECGKGFKYF
ASLDNHMGIHTDEKLCEFQEYGRAVTASSHLKQCVAVHTGKKSKKTKKCGKSFTNFSQLYAPVKTHKGEK
SFECKECGRSFRNSSCLNDHIQIHTGIKPHKCTYCGKAFTRSTQLTEHVRTHTGIKPYECKECGQAFAQY
SGLSIHIRSHSGKKPYQCKECGKAFTTSTSLIQHTRIHTGEKPYECVECGKTFITSSRRSKHLKTHSGEK
PFVCKICGKAFLYSSRLNVHLRTHTGEKPFVCKECGKAFAVSSRLSRHERIHTGEKPYECKDMSVTI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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