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Report for CCDS80029.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
80029.1 Public Mus musculus 3 Dapp1 23 108 98 CCDS HistoryNCBI Gene:26377Re-query CCDS DB by CCDS ID:80029.1Re-query CCDS DB by GeneID:26377See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 80029.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000136613.3 ENSMUSP00000119634.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000136613.3Link to Ensembl Protein Viewer:ENSMUSP00000119634.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000136613Re-query CCDS DB by Protein ID:ENSMUSP00000119634
Original member Current member NCBI NM_001310753.1 NP_001297682.1 Accepted alive Link to Nucleotide Sequence:NM_001310753.1Link to Protein Sequence:NP_001297682.1Re-query CCDS DB by Nucleotide ID:NM_001310753Re-query CCDS DB by Protein ID:NP_001297682Link to BLAST:NP_001297682.1

Chromosomal Locations for CCDS 80029.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 3 (NC_000069.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 137933121 137933189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 137935582 137935669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 137937737 137937822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 137939137 137939199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 137940861 137940908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 137949647 137949777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 137961442 137961575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 137981319 137981419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (720 nt):
ATGGGCAGAGCAGAACTTCTAGGAGGGAACATGAGTACCCAGGATCCCTCAGAGCTGTGGGGCAGAGCAG
ATGGAGGCACAGACCTGCTCCAGGATTTGGGAGCCAAAGACTCTGTCAAACACTTTCATGTTGAATATAC
TGGGTACTCGTTTAAATTCGGCTTTAATGAGTATTCATCTCTAAAGGATTTTGTCAAGCATTTTGCAAAT
CAGCCTTTGATTGGAAGCGAGACAGGGACTCTGATGGTTTTGAAGCATCCCTATCCAAGGGAAGTGGAAG
AACCTTGCATTTACGAATCAGTCCGGGTTCACACAGCGATGCAGACAGGAAGGACAGAGAACGACCTCGT
GCCCACTGCGCCTTCTCTGGGCACCAAAGAAGGCTATCTCACCAAGCAGGGAGGCCTGGTAAAGACCTGG
AAAACAAGATGGTTTACTTTGCAAAGGAACGAACTGAAATATTTCAAAGACCAGATGTCACCAGAACCAA
TTCGGATCCTAGACCTAACAGAGTGCTCAGCTGTTCAATTTGATTACTCACAGGAACGAGTAAACTGTTT
CTGCCTAGTGTTTCCATTCAGGACATTTTATCTCTGTGCAAAGACGGGAGTTGAAGCCGATGAATGGATC
AAAATACTGAGATGGAAGTTGTCAAAAATAAGAAAACAGCTGGATCAAGGAGAAGATACCGTCCGATCTA
GGTCATTTATCTTCAAATAG

Translation (239 aa):
MGRAELLGGNMSTQDPSELWGRADGGTDLLQDLGAKDSVKHFHVEYTGYSFKFGFNEYSSLKDFVKHFAN
QPLIGSETGTLMVLKHPYPREVEEPCIYESVRVHTAMQTGRTENDLVPTAPSLGTKEGYLTKQGGLVKTW
KTRWFTLQRNELKYFKDQMSPEPIRILDLTECSAVQFDYSQERVNCFCLVFPFRTFYLCAKTGVEADEWI
KILRWKLSKIRKQLDQGEDTVRSRSFIFK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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