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Report for CCDS76876.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
76876.1 Public Homo sapiens 16 CIAPIN1 24 110 108 CCDS HistoryNCBI Gene:57019Re-query CCDS DB by CCDS ID:76876.1Re-query CCDS DB by GeneID:57019See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 76876.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000567518.5 ENSP00000456114.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000567518.5Link to Ensembl Protein Viewer:ENSP00000456114.1Re-query CCDS DB by Nucleotide ID:ENST00000567518Re-query CCDS DB by Protein ID:ENSP00000456114
Original member Current member NCBI NM_001308347.2 NP_001295276.1 Accepted alive Link to Nucleotide Sequence:NM_001308347.2Link to Protein Sequence:NP_001295276.1Re-query CCDS DB by Nucleotide ID:NM_001308347Re-query CCDS DB by Protein ID:NP_001295276Link to BLAST:NP_001295276.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001295276.1 299 Q6FI81-3 299 100% 0 0

Chromosomal Locations for CCDS 76876.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 57429170 57429280 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57430258 57430339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57431151 57431266 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57432487 57432560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57434044 57434212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57436656 57436732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57439182 57439295 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57440772 57440928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (900 nt):
ATGGCAGATTTTGGGATCTCTGCTGGCCAGTTTGTGGCAGTGGTCTGGGATAAGTCATCCCCAGTGGAGG
CTCTGAAAGGTCTGGTGGATAAGCTTCAAGCGTTAACCGGCAATGAGGGCCGCGTGTCTGTGGAAAACAT
CAAGCAGCTGTTGCAATGTTTAGTCCCAGGAAGCACCACTCTGCACAGTGCTGAGATTTTGGCTGAAATC
GCCCGGATCCTTCGGCCTGGTGGATGTCTTTTTCTGAAGGAGCCAGTAGAGACAGCTGTAGATAACAATA
GCAAAGTGAAGACAGCATCTAAGCTGTGTTCAGCCCTGACTCTTTCTGGTCTTGTGGAAGTGAAAGAGCT
GCAGCGGGAGCCCCTAACCCCTGAGGAAGTACAGTCTGTTCGAGAACACCTTGGTCATGAAAGTGACAAC
CTGCTGTTTGTTCAGATCACAGGCAAAAAACCAAACTTTGAAGTGGGTTCTTCTAGGCAGCTTAAGCTTT
CCATCACCAAGAAGTCTTCTCCTTCAGTGAAACCTGCTGTGGACCCTGCTGCTGCCAAGCTGTGGACCCT
CTCAGCCAACGATATGGAGGACGACAGCATGGATCTCATTGACTCAGATGAGCTGCTGGATCCAGAAGAT
TTGAAGAAGCCAGATCCAGCTTCCCTGCGGGCTGCTTCTTGTGGGGAAGGGAAAAAGAGGAAGGCCTGTA
AGAACTGCACCTGTGGCCTTGCCGAAGAACTGGAAAAAGAGAAGTCAAGGGAACAGATGAGCTCCCAACC
CAAGTCAGCTTGTGGAAACTGCTACCTGGGCGATGCCTTCCGCTGTGCCAGCTGCCCCTACCTTGGGATG
CCAGCCTTCAAACCTGGGGAAAAGGTGCTTCTGAGTGATAGCAATCTTCATGATGCCTAG

Translation (299 aa):
MADFGISAGQFVAVVWDKSSPVEALKGLVDKLQALTGNEGRVSVENIKQLLQCLVPGSTTLHSAEILAEI
ARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGLVEVKELQREPLTPEEVQSVREHLGHESDN
LLFVQITGKKPNFEVGSSRQLKLSITKKSSPSVKPAVDPAAAKLWTLSANDMEDDSMDLIDSDELLDPED
LKKPDPASLRAASCGEGKKRKACKNCTCGLAEELEKEKSREQMSSQPKSACGNCYLGDAFRCASCPYLGM
PAFKPGEKVLLSDSNLHDA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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