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Report for CCDS74706.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74706.1 Public Homo sapiens 20 KIZ 24 110 108 CCDS HistoryNCBI Gene:55857Re-query CCDS DB by CCDS ID:74706.1Re-query CCDS DB by GeneID:55857See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 74706.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000619189.5 ENSP00000479542.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000619189.5Link to Ensembl Protein Viewer:ENSP00000479542.1Re-query CCDS DB by Nucleotide ID:ENST00000619189Re-query CCDS DB by Protein ID:ENSP00000479542
Original member Current member NCBI NM_018474.6 NP_060944.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018474.6Link to Protein Sequence:NP_060944.3Re-query CCDS DB by Nucleotide ID:NM_018474Re-query CCDS DB by Protein ID:NP_060944Link to BLAST:NP_060944.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060944.3 673 Q2M2Z5-1 673 100% 0 0

Chromosomal Locations for CCDS 74706.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 21126116 21126204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 21132097 21132159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 21136390 21136552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 21145565 21145654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 21161871 21162507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 21162850 21163159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 21205491 21205584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 21214535 21214700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 21215583 21215648 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 21229011 21229115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 21232734 21232830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 21244245 21244288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 21246479 21246576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2022 nt):
ATGAGCCGGACCCTCGCATCGGCCGTGCCCCTGTCGAGTCCCGACTACTACGAGAGGCTGGGCCAACTCC
AGCACGGGCTGCGGGACAGTGAAAAGAAGAGATTGGACCTGGAAAAGAAACTTTATGAATATAATCAGTC
TGATACATGCAGAGTTAAGCTGAAATATGTAAAACTAAAGAATTATCTGAAGGAAATATGTGAATCTGAA
AAGAAGGCTCATACTCGAAACCAAGAATATTTAAAGCGATTTGAGCGTGTCCAAGCTCATGTTGTACACT
TCACCACAAATACAGAGAAGCTTCAAAAACTGAAGCTCGAATATGAGACTCAAATTAAGAAGATGCTATG
CTCAAAAGATAGCCTGGGACTAAAAGAGGAACTGACAGATGAAGACAGAGAAAAGGTTGCAGTGCACGAG
GGGATTAACTCAGGAACAGCCATGTCAAGAGGATTGTATCAACCAGCAACAATCTTTATGGGCCGCCAAA
TGTCAGCCATCTTAAGCATGAGAGATTTCAGTACAGAGCACAAATCTCCCCAGCCCACAAAGAACTTTTC
AATTCCTGACCCACATTCACACCGACAGACAGCCCAGAGCAGTAATGTGACAGACAGCTGTGTAGTACAA
ACTAGTAATGACACACAGTGCTTAAATAAGTCTGACAACATAGATGGAAAGGCATCTCTTCAGATTGGTG
AGAAAATGCCAGTCACAGCCAGTGTATTGTCTGAGGAGGAACAAACTCATTGCTTGGAGATAGGAAGTAA
CACACGTCATGGCAAGAGTAATTTATCTGAAGGCAAAAAGTCTGCTGAACTCAATTCCCCGTTACGGGAA
AGATTAAGTCCAGAGAACAGAACCACTGATTTAAAGTGTGACAGTTCCAGCGGATCAGAGGGAGAAATAC
TGACACGGGAACATATTGAAGTTGAGGAAAAAAGAGCCAGCCCGCCAGTCTCTCCGATACCAGTTTCAGA
ATACTGTGAATCTGAAAATAAGTGGTCTCAAGAGAAGCATTCTCCTTGGGAAGGTGTTTCAGATCATCTT
GCTCACAGGGAACCAAAGTCACAAAAGCCCTTCAGAAAAATGCAGGAAGAGGAGGAGGAAAGTTGGAGCA
CCAGCAGTGACCTTACCATTTCAATAAGTGAAGATGATCTGATTTTAGAGAGCCCAGAACCACAGCCAAA
TCCAGGTGGCAAGATGGAGGGAGAAGATGGAATAGAGGCCTTAAAATTAATCCATGCTGAGCAAGAAAGA
GTTGCCCTATCCACTGAAAAAAATTGTATTTTGCAAACCCTAAGCTCTCCTGATTCAGAAAAGGAATCCT
CCACTAACGCACCAACAAGAGAACCTGGACAAACACCAGACTCAGACGTACCGAGGGCACAGGTGGGTCA
GCATGTTGCCACCTTGAAAGAACATGATAATTCTGTCAAAGAAGAGGCAACAGCATTATTGAGAAAAGCC
CTTACAGAAGAGTGTGGCCGTAGGTCAGCTATTCACAGTAGTGAATCATCTTGCAGCTTGCCATCTATTC
TGAATGACAATAGTGGAATAAAGGAAGCCAAACCTGCTGTATGGCTCAACAGTGTTCCTACAAGGGAACA
AGAAGTTTCAAGTGGCTGTGGAGACAAGAGCAAGAAAGAAAATGTGGCTGCAGATATCCCAATCACAGAA
ACAGAAGCCTATCAGTTGCTGAAGAAGGCCACCCTTCAGGATAATACAAATCAAACTGAAAACAGGTTTC
AAAAGACAGATGCTTCTGTGTCACACTTGTCAGGTTTGAATATTGGCAGCGGTGCATTCGAGACAAAGAC
AGCTAACAAAATTGCTTCGGAAGCTAGTTTTTCATCTAGTGAAGGAAGTCCTTTGTCAAGGCATGAAAAC
AAAAAGAAACCCGTGATCAATTTAAAATCTAATGCCCTCTGGGATGAGTCTGATGACAGTAACTCAGAAA
TTGAGGCTGCTTTACGCCCCAGAAACCATAACACCGATGATTCTGATGATTTTTATGACTAA

Translation (673 aa):
MSRTLASAVPLSSPDYYERLGQLQHGLRDSEKKRLDLEKKLYEYNQSDTCRVKLKYVKLKNYLKEICESE
KKAHTRNQEYLKRFERVQAHVVHFTTNTEKLQKLKLEYETQIKKMLCSKDSLGLKEELTDEDREKVAVHE
GINSGTAMSRGLYQPATIFMGRQMSAILSMRDFSTEHKSPQPTKNFSIPDPHSHRQTAQSSNVTDSCVVQ
TSNDTQCLNKSDNIDGKASLQIGEKMPVTASVLSEEEQTHCLEIGSNTRHGKSNLSEGKKSAELNSPLRE
RLSPENRTTDLKCDSSSGSEGEILTREHIEVEEKRASPPVSPIPVSEYCESENKWSQEKHSPWEGVSDHL
AHREPKSQKPFRKMQEEEEESWSTSSDLTISISEDDLILESPEPQPNPGGKMEGEDGIEALKLIHAEQER
VALSTEKNCILQTLSSPDSEKESSTNAPTREPGQTPDSDVPRAQVGQHVATLKEHDNSVKEEATALLRKA
LTEECGRRSAIHSSESSCSLPSILNDNSGIKEAKPAVWLNSVPTREQEVSSGCGDKSKKENVAADIPITE
TEAYQLLKKATLQDNTNQTENRFQKTDASVSHLSGLNIGSGAFETKTANKIASEASFSSSEGSPLSRHEN
KKKPVINLKSNALWDESDDSNSEIEAALRPRNHNTDDSDDFYD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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