NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS73242.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73242.1 Public Homo sapiens 11 ART5 24 110 108 CCDS HistoryNCBI Gene:116969Re-query CCDS DB by CCDS ID:73242.1Re-query CCDS DB by GeneID:116969See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73242.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000397067.7 ENSP00000380257.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000397067.7Link to Ensembl Protein Viewer:ENSP00000380257.3Re-query CCDS DB by Nucleotide ID:ENST00000397067Re-query CCDS DB by Protein ID:ENSP00000380257
Original member Current member NCBI NM_001297668.2 NP_001284597.1 Accepted alive Link to Nucleotide Sequence:NM_001297668.2Link to Protein Sequence:NP_001284597.1Re-query CCDS DB by Nucleotide ID:NM_001297668Re-query CCDS DB by Protein ID:NP_001284597Link to BLAST:NP_001284597.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001284597.1 239 Q96L15-2 239 100% 0 0

Chromosomal Locations for CCDS 73242.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 3638816 3638919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3639003 3639035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3639846 3640371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3641806 3641862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (720 nt):
ATGGCGCTGGCGGCTTTGATGATCGCCCTCGGCAGCCTCGGCCTCCACACCTGGCAGGCCCAGGCTGTTC
CC
ATCCTGCCCCTGGGCCTGGCTCCAGACACCTTTGACGATACCTATGTGGGTTGTGCAGAGGAGATGGA
G
GAGAAGGCAGCCCCCCTGCTAAAGGAGGAAATGGCCCACCATGCCCTGCTGCGGGAATCCTGGGAGGCA
GCC
CAGGAGACCTGGGAGGACAAGCGTCGAGGGCTTACCTTGCCCCCTGGCTTCAAAGCCCAGAATGGAA
TA
GCCATTATGGTCTACACCAACTCATCGAACACCTTGTACTGGGAGTTGAATCAGGCCGTGCGGACGGG
C
GGAGGCTCCCGGGAGCTCTACATGAGGCACTTTCCCTTCAAGGCCCTGCATTTCTACCTGATCCGGGCC
CTG
CAGCTGCTGCGAGGCAGTGGGGGCTGCAGCAGGGGACCTGGGGAGGTGGTGTTCCGAGGTGTGGGCA
GC
CTTCGCTTTGAACCCAAGAGGCTGGGAGACTCTGTCCGCTTGGGCCAGTTTGCCTCCAGCTCCCTGGA
T
AAGGCAGTGGCCCACAGATTTGGGGAGAAGAGGCGGGGCTGTGTGTCTGCGCCAGGGGTGCAGCTAGGG
TCA
CAATCTGAGGGGGCCTCCTCTCTGCCCCCCTGGAAGACTCTGCTCTTGGCCCCTGGAGAGTTCCAGC
TC
TCAGGGGTTGGGCCCTGA


Translation (239 aa):
MALAALMIALGSLGLHTWQAQAVPILPLGLAPDTFDDTYVGCAEEMEEKAAPLLKEEMAHHALLRESWEA
A
QETWEDKRRGLTLPPGFKAQNGIAIMVYTNSSNTLYWELNQAVRTGGGSRELYMRHFPFKALHFYLIRA
L
QLLRGSGGCSRGPGEVVFRGVGSLRFEPKRLGDSVRLGQFASSSLDKAVAHRF
GEKRRGCVSAPGVQLG
S
QSEGASSLPPWKTLLLAPGEFQLSGVGP




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser