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Report for CCDS71958.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
71958.1 Public Mus musculus 7 Cd37 23 108 98 CCDS HistoryNCBI Gene:12493Re-query CCDS DB by CCDS ID:71958.1Re-query CCDS DB by GeneID:12493See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 71958.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000033063.14 ENSMUSP00000033063.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000033063.14Link to Ensembl Protein Viewer:ENSMUSP00000033063.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000033063Re-query CCDS DB by Protein ID:ENSMUSP00000033063
Original member Current member NCBI NM_001290802.1 NP_001277731.1 Accepted alive Link to Nucleotide Sequence:NM_001290802.1Link to Protein Sequence:NP_001277731.1Re-query CCDS DB by Nucleotide ID:NM_001290802Re-query CCDS DB by Protein ID:NP_001277731Link to BLAST:NP_001277731.1

Chromosomal Locations for CCDS 71958.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 45233901 45233978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45234684 45234767 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45235407 45235643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45236115 45236219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45237002 45237076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45237160 45237284 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45238500 45238572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45238660 45238734 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45238960 45239019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (912 nt):
ATGGACACCTGCGAGGAACCCATTGTGTCCCTGGCACCCACATATTCCAAGGACCCTCAGGCGAAGATGT
CCGCCCAAGAGAGTTGCCTCAGCCTCATCAAGTACTTCCTCTTCGTTTTCAACCTCTTCTTCTTTGTACT
AGGCGGCCTGATTTTCTGCTTCGGCACCTGGATCCTCATTGACAAGACCAGCTTCGTGTCCTTTGTGGGT
TTGTCCTTCGTGCCACTGCAGACTTGGTCCAAGGTCCTGGCTGTCTCAGGTGTCCTCACCATGGCCCTGG
CTCTCCTGGGCTGTGTGGGGGCTCTAAAGGAGCTGCGCTGTCTCCTGGGCCTGTATTTTGGAATGCTGCT
GCTCCTGTTTGCCACACAGATTACCCTGGGCATCCTCATTTCCACTCAGCGGGTCCGGCTGGAGCGAAGG
GTGCAGGAATTGGTGTTGAGGACGATCCAGAGCTACCGCACGAATCCGGATGAGACAGCAGCCGAGGAGA
GTTGGGACTATGCACAGTTCCAGCTGCGCTGCTGCGGCTGGCAATCTCCGCGGGACTGGAACAAGGCCCA
GATGCTGAAAGCGAACGAGTCTGAGGAGCCCTTTGTGCCCTGCTCCTGCTACAACTCCACGGCGACCAAT
GACTCCACCGTCTTTGATAAGCTCTTTTTCTCCCAGCTAAGCCGGTTGGGGCCGCGGGCGAAGCTGAGGC
AGACTGCTGACATATGTGCACTCCCTGCAAAAGCTCACATCTACCGTGAGGGCTGCGCGCAGAGCCTCCA
GAAGTGGCTGCACAACAATATCATCTCCATAGTGGGAATCTGTCTGGGAGTCGGTCTTCTTGAGCTCGGC
TTCATGACGCTCTCAATATTCCTGTGTAGAAATCTGGATCACGTCTATGACCGGCTGGCCCGGTACCGCT
AG

Translation (303 aa):
MDTCEEPIVSLAPTYSKDPQAKMSAQESCLSLIKYFLFVFNLFFFVLGGLIFCFGTWILIDKTSFVSFVG
LSFVPLQTWSKVLAVSGVLTMALALLGCVGALKELRCLLGLYFGMLLLLFATQITLGILISTQRVRLERR
VQELVLRTIQSYRTNPDETAAEESWDYAQFQLRCCGWQSPRDWNKAQMLKANESEEPFVPCSCYNSTATN
DSTVFDKLFFSQLSRLGPRAKLRQTADICALPAKAHIYREGCAQSLQKWLHNNIISIVGICLGVGLLELG
FMTLSIFLCRNLDHVYDRLARYR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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