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Report for CCDS70218.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
70218.1 Public Mus musculus 11 Fgf11 23 108 98 CCDS HistoryNCBI Gene:14166Re-query CCDS DB by CCDS ID:70218.1Re-query CCDS DB by GeneID:14166See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 70218.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000011285.10 ENSMUSP00000011285.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000011285.10Link to Ensembl Protein Viewer:ENSMUSP00000011285.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000011285Re-query CCDS DB by Protein ID:ENSMUSP00000011285
Original member Current member NCBI NM_001291104.2 NP_001278033.1 Accepted alive Link to Nucleotide Sequence:NM_001291104.2Link to Protein Sequence:NP_001278033.1Re-query CCDS DB by Nucleotide ID:NM_001291104Re-query CCDS DB by Protein ID:NP_001278033Link to BLAST:NP_001278033.1

Chromosomal Locations for CCDS 70218.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 69798202 69798272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 69798564 69798678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 69799352 69799455 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 69799666 69799776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 69801433 69801625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (594 nt):
ATGGCGGCGTTGGCCAGTAGCCTGATCCGACAGAAGCGGGAGGTCCGCGAGCCCGGGGGCAGCCGGCCCG
TGTCGGCGCAGCGGCGCGTGTGTCCCCGCGGTACCAAGTCACTTTGCCAGAAACAGCTCCTCATCCTGCT
GTCCAAGGTGCGACTGTGCGGGGGGCGTCCCACGCGACAGGACCGCGGCCCAGAGCCTCAGCTCAAAGGC
ATCGTCACCAAACTGTTCTGCCGCCAGGGTTTCTACCTCCAGGCGAATCCCGATGGGAGTATCCAGGGCA
CCCCAGAGGACACCAGCTCCTTCACCCACTTCAATCTGATTCCTGTGGGACTCCGTGTGGTCACCATCCA
GAGTGCCAAGCTGGGTCACTACATGGCCATGAACGCTGAGGGGCTATTGTACAGCTCGCGTCGTTCTGGC
CGGGCCTGGTACCTAGGCCTGGACAAGGAAGGCCGGGTCATGAAGGGAAACCGAGTCAAGAAGACCAAGG
CAGCTGCCCACTTTGTGCCCAAGCTCCTGGAGGTGGCCATGTACCGGGAGCCTTCTCTCCACAGTGTTCC
TGAGACCTCCCCTTCCAGTCCCCCTGCCCACTGA

Translation (197 aa):
MAALASSLIRQKREVREPGGSRPVSAQRRVCPRGTKSLCQKQLLILLSKVRLCGGRPTRQDRGPEPQLKG
IVTKLFCRQGFYLQANPDGSIQGTPEDTSSFTHFNLIPVGLRVVTIQSAKLGHYMAMNAEGLLYSSRRSG
RAWYLGLDKEGRVMKGNRVKKTKAAAHFVPKLLEVAMYREPSLHSVPETSPSSPPAH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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