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Report for CCDS5904.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5904.1 Public Homo sapiens 7 GIMAP4 24 110 108 CCDS HistoryNCBI Gene:55303Re-query CCDS DB by CCDS ID:5904.1Re-query CCDS DB by GeneID:55303See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5904.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000255945.4 ENSP00000255945.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000255945.4Link to Ensembl Protein Viewer:ENSP00000255945.2Re-query CCDS DB by Nucleotide ID:ENST00000255945Re-query CCDS DB by Protein ID:ENSP00000255945
Original member Current member NCBI NM_018326.3 NP_060796.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018326.3Link to Protein Sequence:NP_060796.1Re-query CCDS DB by Nucleotide ID:NM_018326Re-query CCDS DB by Protein ID:NP_060796Link to BLAST:NP_060796.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060796.1 329 Q9NUV9 329 100% 0 0

Chromosomal Locations for CCDS 5904.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 150569902 150569959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 150572129 150573060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (990 nt):
ATGGCAGCCCAATACGGCAGTATGAGCTTCAACCCCAGCACACCAGGGGCCAGTTATGGGCCTGGAAGGC
AAGAGCCCAGAAATTCCCAATTGAGAATTGTGTTAGTGGGTAAAACCGGAGCAGGAAAAAGTGCAACAGG
AAACAGCATCCTTGGCCGGAAAGTGTTTCATTCTGGCACTGCAGCAAAATCCATTACCAAGAAGTGTGAG
AAACGCAGCAGCTCATGGAAGGAAACAGAACTTGTCGTAGTTGACACACCAGGCATTTTCGACACAGAGG
TGCCCAATGCTGAAACGTCCAAGGAGATTATTCGCTGCATTCTTCTGACCTCCCCAGGGCCTCATGCTCT
GCTTCTGGTGGTTCCACTGGGCCGTTACACTGAGGAAGAGCACAAAGCCACAGAGAAGATCCTGAAAATG
TTTGGAGAGAGGGCTAGAAGTTTCATGATTCTCATATTCACCCGGAAAGATGACTTAGGTGACACCAATT
TGCATGACTACTTAAGGGAAGCTCCAGAAGACATTCAAGACTTGATGGACATTTTCGGTGACCGCTACTG
TGCGTTAAACAACAAGGCAACAGGCGCTGAGCAGGAGGCCCAGAGGGCACAGTTGCTGGGCCTGATCCAG
CGCGTGGTGAGGGAGAACAAGGAAGGCTGCTACACTAATAGGATGTACCAAAGGGCGGAGGAGGAGATCC
AGAAGCAAACACAAGCAATGCAAGAACTCCACAGAGTGGAGCTGGAGAGAGAGAAAGCGCGGATAAGAGA
GGAGTATGAAGAGAAAATCAGAAAGCTGGAAGATAAAGTGGAGCAGGAAAAGAGAAAGAAGCAAATGGAG
AAGAAACTAGCAGAACAGGAGGCTCACTATGCTGTAAGGCAGCAAAGGGCAAGAACGGAAGTGGAGAGTA
AGGATGGGATACTTGAATTAATCATGACAGCGTTACAGATTGCTTCCTTTATTTTGTTACGTCTGTTCGC
GGAAGATTAA

Translation (329 aa):
MAAQYGSMSFNPSTPGASYGPGRQEPRNSQLRIVLVGKTGAGKSATGNSILGRKVFHSGTAAKSITKKCE
KRSSSWKETELVVVDTPGIFDTEVPNAETSKEIIRCILLTSPGPHALLLVVPLGRYTEEEHKATEKILKM
FGERARSFMILIFTRKDDLGDTNLHDYLREAPEDIQDLMDIFGDRYCALNNKATGAEQEAQRAQLLGLIQ
RVVRENKEGCYTNRMYQRAEEEIQKQTQAMQELHRVELEREKARIREEYEEKIRKLEDKVEQEKRKKQME
KKLAEQEAHYAVRQQRARTEVESKDGILELIMTALQIASFILLRLFAED


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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