NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS58668.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58668.1 Public Homo sapiens 19 ZNF155 24 110 108 CCDS HistoryNCBI Gene:7711Re-query CCDS DB by CCDS ID:58668.1Re-query CCDS DB by GeneID:7711See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58668.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000407951.6 ENSP00000385163.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000407951.6Link to Ensembl Protein Viewer:ENSP00000385163.2Re-query CCDS DB by Nucleotide ID:ENST00000407951Re-query CCDS DB by Protein ID:ENSP00000385163
Original member Current member NCBI NM_001260488.2 NP_001247417.2 Accepted alive Link to Nucleotide Sequence:NM_001260488.2Link to Protein Sequence:NP_001247417.2Re-query CCDS DB by Nucleotide ID:NM_001260488Re-query CCDS DB by Protein ID:NP_001247417Link to BLAST:NP_001247417.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001247417.2 549 Q12901-2 549 100% 0 0

Chromosomal Locations for CCDS 58668.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 43990065 43990112 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 43991548 43991674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 43991842 43991934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 43996093 43997474 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1650 nt):
ATGATAAAGAGAAGCAAAGTACTTGTATTCTGTTCAAAGATTATGGAGGAGGCAGTGACCTTCAAGGATG
TGGCTGTGGTCTTCACTGAGGAGGAGCTGGGGCTGCTGGACCCTGCCCAGAGGAAGCTGTACCGAGATGT
GATGCTGGAGAACTTCAGGAACCTGCTCTCAGTGGGGCATCAACCGTTCCACCAAGATACTTGCCACTTC
CTAAGGGAAGAAAAGTTTTGGATGATGGGGACAGCAACCCAAAGAGAAGGGAATTCAGGAGGCAAGATCC
AAACTGAGTTGGAGTCTGTTCCAGAAGCAGGAGCACATGAAGAGTGGTCCTGCCAGCAAATCTGGGAACA
AATTGCAAAAGACTTAACCAGGTCTCAGGACTCTATCATAAATAACTCTCAGTTCTTTGAAAATGGTGAT
GTCCCCTCCCAGGTTGAAGCAGGACTACCCACAATTCATACAGGACAGAAACCTTCCCAGGGTGGGAAGT
GTAAACAGTCCATCAGTGATGTTCCCATCTTTGATCTTCCTCAGCAGTTATACTCAGAAGAGAAGTCTTA
TACATGTGATGAGTGTGGAAAAAGCATCTGTTACATCTCAGCTCTTCATGTTCATCAGAGAGTCCACGTG
GGAGAGAAACTCTTTATGTGTGATGTGTGTGGCAAGGAATTTAGTCAAAGCTCACATCTGCAAACTCATC
AGAGAGTCCACACTGGAGAGAAACCATTCAAATGTGAGCAATGTGGGAAAGGTTTCAGTCGTAGATCAGC
ACTTAATGTTCATCGTAAATTACACACAGGAGAGAAACCTTACATTTGTGAGGCATGTGGGAAGGCCTTC
ATTCATGATTCCCAGCTTAAGGAACATAAGAGAATCCATACTGGGGAGAAACCATTCAAATGTGATATAT
GTGGTAAGACCTTCTATTTTAGGTCAAGACTTAAGAGCCATTCCATGGTTCACACAGGAGAAAAACCATT
TAGGTGTGATACATGTGATAAGAGCTTTCATCAGAGATCAGCACTTAATAGGCATTGCATGGTCCACACA
GGAGAGAAACCGTACAGATGTGAGCAGTGTGGAAAAGGCTTTATTGGTAGGCTAGATTTTTATAAGCATC
AGGTGGTCCACACAGGAGAAAAACCATATAATTGTAAAGAATGTGGGAAGAGCTTCAGATGGTCCTCATG
CCTTTTGAACCATCAGCGAGTCCACAGTGGAGAAAAAAGCTTCAAATGTGAAGAATGTGGAAAGGGATTT
TATACAAATTCACAACTGTCTTCCCATCAGAGATCCCACAGTGGTGAAAAGCCATATAAATGTGAGGAGT
GTGGGAAGGGCTATGTTACTAAGTTTAATCTTGACTTGCACCAGAGGGTCCACACGGGAGAGAGACCTTA
TAATTGTAAGGAATGTGGGAAGAACTTTAGCCGGGCCTCAAGTATTTTGAATCATAAGAGACTCCACTGC
CAGAAAAAACCATTCAAATGTGAGGACTGTGGAAAGAGGCTTGTACACAGGACATACCGTAAAGACCAGC
CGAGAGACTATAGTGGGGAAAACCCATCCAAATGTGAGGATTGTGGGAGACGCTACAAGAGGCGCTTGAA
TCTGGATATACTTTTATCATTATTTCTAAATGACACATAA

Translation (549 aa):
MIKRSKVLVFCSKIMEEAVTFKDVAVVFTEEELGLLDPAQRKLYRDVMLENFRNLLSVGHQPFHQDTCHF
LREEKFWMMGTATQREGNSGGKIQTELESVPEAGAHEEWSCQQIWEQIAKDLTRSQDSIINNSQFFENGD
VPSQVEAGLPTIHTGQKPSQGGKCKQSISDVPIFDLPQQLYSEEKSYTCDECGKSICYISALHVHQRVHV
GEKLFMCDVCGKEFSQSSHLQTHQRVHTGEKPFKCEQCGKGFSRRSALNVHRKLHTGEKPYICEACGKAF
IHDSQLKEHKRIHTGEKPFKCDICGKTFYFRSRLKSHSMVHTGEKPFRCDTCDKSFHQRSALNRHCMVHT
GEKPYRCEQCGKGFIGRLDFYKHQVVHTGEKPYNCKECGKSFRWSSCLLNHQRVHSGEKSFKCEECGKGF
YTNSQLSSHQRSHSGEKPYKCEECGKGYVTKFNLDLHQRVHTGERPYNCKECGKNFSRASSILNHKRLHC
QKKPFKCEDCGKRLVHRTYRKDQPRDYSGENPSKCEDCGRRYKRRLNLDILLSLFLNDT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH