NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS57634.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57634.1 Public Mus musculus 8 Ndrg4 23 108 98 CCDS HistoryNCBI Gene:234593Re-query CCDS DB by CCDS ID:57634.1Re-query CCDS DB by GeneID:234593See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 57634.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000073139.13 ENSMUSP00000072883.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000073139.13Link to Ensembl Protein Viewer:ENSMUSP00000072883.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000073139Re-query CCDS DB by Protein ID:ENSMUSP00000072883
Original member NCBI NM_001195006.1 NP_001181935.1 Updated not alive Link to Nucleotide Sequence:NM_001195006.1Link to Protein Sequence:NP_001181935.1Re-query CCDS DB by Nucleotide ID:NM_001195006Re-query CCDS DB by Protein ID:NP_001181935
Current member NCBI NM_001195006.2 NP_001181935.1 Accepted alive Link to Nucleotide Sequence:NM_001195006.2Link to Protein Sequence:NP_001181935.1Re-query CCDS DB by Nucleotide ID:NM_001195006Re-query CCDS DB by Protein ID:NP_001181935Link to BLAST:NP_001181935.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001181935.1 352 Q8BTG7-1 352 100% 0 0

Chromosomal Locations for CCDS 57634.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 95703157 95703177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95706188 95706293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95706531 95706651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95706737 95706799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95706929 95706989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95708608 95708694 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95708777 95708833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95709083 95709186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95709766 95709822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95709903 95709954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95710664 95710711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95710934 95710969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95711093 95711144 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95712325 95712363 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95713178 95713332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1059 nt):
ATGCCGGAGTGCTGGGATGGGGAACATGACATCGAGACGCCTTATGGACTTCTGCATGTGGTGATCCGGG
GCTCTCCCAAAGGGAACCGCCCAGCCATCCTCACCTACCATGATGTGGGTCTCAATCACAAGCTGTGCTT
CAACACCTTCTTCAACTTTGAGGACATGCAGGAGATCACCAAACACTTTGTGGTGTGCCACGTGGATGCC
CCTGGGCAGCAGGTGGGAGCGTCACAGTTCCCTCAGGGGTACCAGTTCCCCTCCATGGAGCAGCTGGCCG
CCATGCTCCCGAGTGTGGTACAGCACTTTGGGTTTAAGTACGTGATTGGCATTGGAGTGGGAGCCGGAGC
CTACGTGCTGGCCAAGTTTGCACTCATCTTCCCTGACCTGGTGGAGGGGCTGGTGTTGATGAACATTGAC
CCCAACGGCAAAGGCTGGATTGACTGGGCTGCCACCAAGCTCTCTGGCTTGACCAGCACTTTACCAGACA
CTGTACTCTCCCATCTCTTCAGCCAGGAGGAGCTGGTGAACAACACGGAGCTGGTGCAGAGCTACCGGCA
GCAGATCTCAAACGTGGTGAACCAGGCCAACCTGCAGCTCTTCTGGAACATGTACAACAGCCGCAGAGAC
CTTGATATTAACCGACCTGGGACGGTGCCCAATGCCAAGACACTCCGCTGCCCAGTGATGCTGGTAGTCG
GAGATAATGCACCTGCTGAGGAAGGGGTGGTTGAGTGTAACTCCAAACTGGACCCAACCACTACGACCTT
CCTGAAGATGGCAGATTCTGGTGGTCTTCCTCAGGTGACACAACCAGGGAAGCTGACTGAGGCCTTCAAG
TACTTCCTGCAAGGCATGGGCTACATTGCACACTTGAAGGACCGAAGGCTGAGTGGAGGAGCAGTGCCCT
CAGCCAGCATGACCCGCCTCGCACGCTCACGTACCGCGTCCCTCACCAGCGCCAGTTCCGTGGACGGCAG
CCGCCCTCAGCCCTGCGCCCACTCAGACAGCAGTGAGGGGATGGGCCAGGTCAACCACACCATGGAGGTG
TCCTGCTGA

Translation (352 aa):
MPECWDGEHDIETPYGLLHVVIRGSPKGNRPAILTYHDVGLNHKLCFNTFFNFEDMQEITKHFVVCHVDA
PGQQVGASQFPQGYQFPSMEQLAAMLPSVVQHFGFKYVIGIGVGAGAYVLAKFALIFPDLVEGLVLMNID
PNGKGWIDWAATKLSGLTSTLPDTVLSHLFSQEELVNNTELVQSYRQQISNVVNQANLQLFWNMYNSRRD
LDINRPGTVPNAKTLRCPVMLVVGDNAPAEEGVVECNSKLDPTTTTFLKMADSGGLPQVTQPGKLTEAFK
YFLQGMGYIAHLKDRRLSGGAVPSASMTRLARSRTASLTSASSVDGSRPQPCAHSDSSEGMGQVNHTMEV
SC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH