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Report for CCDS55153.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55153.1 Public Homo sapiens 7 NRCAM 24 110 108 CCDS HistoryNCBI Gene:4897Re-query CCDS DB by CCDS ID:55153.1Re-query CCDS DB by GeneID:4897See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55153.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000379024.8 ENSP00000368310.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000379024.8Link to Ensembl Protein Viewer:ENSP00000368310.4Re-query CCDS DB by Nucleotide ID:ENST00000379024Re-query CCDS DB by Protein ID:ENSP00000368310
Original member Current member NCBI NM_001193583.2 NP_001180512.1 Accepted alive Link to Nucleotide Sequence:NM_001193583.2Link to Protein Sequence:NP_001180512.1Re-query CCDS DB by Nucleotide ID:NM_001193583Re-query CCDS DB by Protein ID:NP_001180512Link to BLAST:NP_001180512.1
Original member Current member NCBI NM_001371122.1 NP_001358051.1 Accepted alive Link to Nucleotide Sequence:NM_001371122.1Link to Protein Sequence:NP_001358051.1Re-query CCDS DB by Nucleotide ID:NM_001371122Re-query CCDS DB by Protein ID:NP_001358051Link to BLAST:NP_001358051.1
Original member Current member NCBI NM_001371139.1 NP_001358068.1 Accepted alive Link to Nucleotide Sequence:NM_001371139.1Link to Protein Sequence:NP_001358068.1Re-query CCDS DB by Nucleotide ID:NM_001371139Re-query CCDS DB by Protein ID:NP_001358068Link to BLAST:NP_001358068.1
Original member Current member NCBI NM_001371155.1 NP_001358084.1 Accepted alive Link to Nucleotide Sequence:NM_001371155.1Link to Protein Sequence:NP_001358084.1Re-query CCDS DB by Nucleotide ID:NM_001371155Re-query CCDS DB by Protein ID:NP_001358084Link to BLAST:NP_001358084.1
Original member Current member NCBI NM_001371163.1 NP_001358092.1 Accepted alive Link to Nucleotide Sequence:NM_001371163.1Link to Protein Sequence:NP_001358092.1Re-query CCDS DB by Nucleotide ID:NM_001371163Re-query CCDS DB by Protein ID:NP_001358092Link to BLAST:NP_001358092.1
Original member Current member NCBI NM_001371165.1 NP_001358094.1 Accepted alive Link to Nucleotide Sequence:NM_001371165.1Link to Protein Sequence:NP_001358094.1Re-query CCDS DB by Nucleotide ID:NM_001371165Re-query CCDS DB by Protein ID:NP_001358094Link to BLAST:NP_001358094.1
Original member Current member NCBI NM_001371167.1 NP_001358096.1 Accepted alive Link to Nucleotide Sequence:NM_001371167.1Link to Protein Sequence:NP_001358096.1Re-query CCDS DB by Nucleotide ID:NM_001371167Re-query CCDS DB by Protein ID:NP_001358096Link to BLAST:NP_001358096.1
Original member Current member NCBI NM_001371177.1 NP_001358106.1 Accepted alive Link to Nucleotide Sequence:NM_001371177.1Link to Protein Sequence:NP_001358106.1Re-query CCDS DB by Nucleotide ID:NM_001371177Re-query CCDS DB by Protein ID:NP_001358106Link to BLAST:NP_001358106.1
Original member Current member NCBI NM_001371181.1 NP_001358110.1 Accepted alive Link to Nucleotide Sequence:NM_001371181.1Link to Protein Sequence:NP_001358110.1Re-query CCDS DB by Nucleotide ID:NM_001371181Re-query CCDS DB by Protein ID:NP_001358110Link to BLAST:NP_001358110.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001180512.1 1192 Q92823-6 1192 100% 0 0
NP_001358051.1 1192 Q92823-6 1192 100% 0 0
NP_001358068.1 1192 Q92823-6 1192 100% 0 0
NP_001358084.1 1192 Q92823-6 1192 100% 0 0
NP_001358092.1 1192 Q92823-6 1192 100% 0 0
NP_001358094.1 1192 Q92823-6 1192 100% 0 0
NP_001358096.1 1192 Q92823-6 1192 100% 0 0
NP_001358106.1 1192 Q92823-6 1192 100% 0 0
NP_001358110.1 1192 Q92823-6 1192 100% 0 0

Chromosomal Locations for CCDS 55153.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 108149910 108150147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 108159463 108159541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 108160361 108160492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 108175322 108175357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 108176430 108176606 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 108177990 108178112 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 108180223 108180427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 108181822 108181937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 108182695 108182920 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 108184241 108184311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 108184417 108184614 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 108189645 108189746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 108191254 108191283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 108191729 108191853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 108194024 108194171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 108194262 108194428 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 108195761 108195872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 108197956 108198099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 108207528 108207659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 108209421 108209605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 108223725 108223836 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 108226208 108226378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 108231031 108231153 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 108232326 108232522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 108234583 108234688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 108237752 108237769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 108239959 108240064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3579 nt):
ATGCAGCTTAAAATAATGCCGAAAAAGAAGCGCTTATCTGCGGGCAGAGTGCCCCTGATTCTCTTCCTGT
GCCAGATGATTAGTGCACTGGAAGTACCTCTTGATCCAAAACTTCTTGAAGACTTGGTACAGCCTCCAAC
CATCACCCAACAGTCTCCAAAAGATTACATTATTGACCCTCGGGAGAATATTGTAATCCAGTGTGAAGCC
AAAGGGAAACCGCCCCCAAGCTTTTCCTGGACCCGTAATGGGACTCATTTTGACATCGATAAAGACCCTC
TGGTCACCATGAAGCCTGGCACAGGAACGCTCATAATTAACATCATGAGCGAAGGGAAAGCTGAGACCTA
TGAAGGAGTCTATCAGTGTACAGCAAGGAACGAACGCGGAGCTGCAGTTTCTAATAACATTGTTGTCCGC
CCATCCAGATCACCATTGTGGACCAAAGAAAAACTTGAACCAATCACACTTCAAAGTGGTCAGTCTTTAG
TACTTCCCTGCAGACCCCCAATTGGATTACCACCACCTATAATATTTTGGATGGATAATTCCTTTCAAAG
ACTTCCACAAAGTGAGAGAGTTTCTCAAGGTTTGAATGGGGACCTTTATTTTTCCAATGTCCTCCCAGAG
GACACCCGCGAAGACTATATCTGTTATGCTAGATTTAATCATACTCAAACCATACAGCAGAAGCAACCTA
TTTCTGTGAAGGTGATTTCAGCTAAATCAAGTAGAGAGAGGCCACCAACATTTTTAACTCCAGAAGGCAA
TGCAAGTAACAAAGAGGAATTAAGAGGAAATGTGCTTTCACTGGAGTGCATTGCAGAAGGACTGCCTACC
CCAATTATTTACTGGGCAAAGGAAGATGGAATGCTACCCAAAAACAGGACAGTTTATAAGAACTTTGAGA
AAACCTTGCAGATCATTCATGTTTCAGAAGCAGACTCTGGAAATTACCAATGTATAGCAAAAAACGCATT
AGGAGCCATCCACCATACCATTTCTGTTAGAGTTAAAGCGGCTCCATACTGGATCACAGCCCCTCAAAAT
CTTGTGCTGTCCCCAGGAGAGGATGGGACCTTGATCTGCAGAGCTAATGGCAACCCCAAACCCAGAATTA
GCTGGTTAACAAATGGAGTCCCAATAGAAATTGCCCCTGATGACCCCAGCAGAAAAATAGATGGCGATAC
CATTATTTTTTCAAATGTTCAAGAAAGATCAAGTGCAGTCTATCAGTGCAATGCCTCTAATGAATATGGA
TATTTACTGGCAAACGCATTTGTAAATGTGCTGGCTGAGCCACCACGAATCCTCACACCTGCAAACACAC
TCTACCAGGTCATTGCAAACAGGCCTGCTTTACTAGACTGTGCCTTCTTTGGGTCTCCTCTCCCAACCAT
CGAGTGGTTTAAAGGAGCTAAAGGAAGTGCTCTTCATGAAGATATTTATGTTTTACATGAAAATGGAACT
TTGGAAATTCCTGTGGCCCAAAAGGACAGTACAGGAACTTATACGTGTGTTGCAAGGAATAAATTAGGGA
TGGCGAAGAATGAAGTTCACTTAGAAATCAAAGATCCTACATGGATCGTTAAACAGCCCGAATATGCAGT
TGTGCAAAGAGGGAGCATGGTGTCCTTTGAATGCAAAGTGAAACATGATCACACCTTATCCCTCACTGTC
CTGTGGCTGAAGGACAACAGGGAACTGCCCAGTGATGAAAGGTTCACTGTTGACAAGGATCATCTAGTGG
TAGCTGATGTCAGTGACGATGACAGCGGGACCTACACGTGTGTGGCCAACACCACTCTGGACAGCGTCTC
CGCCAGCGCTGTGCTTAGCGTTGTTGCTCCTACTCCAACTCCAGCTCCCGTTTACGATGTCCCAAATCCT
CCCTTTGACTTAGAACTGACAGATCAACTTGACAAAAGTGTTCAGCTGTCATGGACCCCAGGCGATGACA
ACAATAGCCCCATTACAAAATTCATCATCGAATATGAAGATGCAATGCACAAGCCAGGGCTGTGGCACCA
CCAAACTGAAGTTTCTGGAACACAGACCACAGCCCAGCTGAAGCTGTCTCCTTACGTGAACTACTCCTTC
CGCGTGATGGCAGTGAACAGCATTGGGAAGAGCTTGCCCAGCGAGGCGTCTGAGCAGTATTTGACGAAAG
CCTCAGAACCAGATAAAAACCCCACAGCTGTGGAAGGACTGGGATCAGAGCCTGATAATTTGGTGATTAC
GTGGAAGCCCTTGAATGGTTTCGAATCTAATGGGCCAGGCCTTCAGTACAAAGTTAGCTGGCGCCAGAAA
GATGGTGATGATGAATGGACATCTGTGGTTGTGGCAAATGTATCCAAATATATTGTCTCAGGCACGCCAA
CCTTTGTTCCATACCTGATCAAAGTTCAGGCCCTGAATGACATGGGGTTTGCCCCCGAGCCAGCTGTAGT
CATGGGACATTCTGGAGAAGACCTCCCAATGGTGGCTCCTGGGAACGTGCGTGTGAATGTGGTGAACAGT
ACCTTAGCCGAGGTGCACTGGGACCCAGTACCTCTGAAAAGCATCCGAGGACACCTACAAGGCTATCGGA
TTTACTATTGGAAGACCCAGAGTTCATCTAAAAGAAACAGACGTCACATTGAGAAAAAGATCCTCACCTT
CCAAGGCAGCAAGACTCATGGCATGTTGCCGGGGCTAGAGCCCTTTAGCCACTACACACTGAATGTCCGA
GTGGTCAATGGGAAAGGGGAGGGCCCAGCCAGCCCTGACAGAGTCTTTAATACTCCAGAAGGAGTCCCCA
GTGCTCCCTCGTCTTTGAAGATTGTGAATCCAACACTGGACTCTCTCACTTTGGAATGGGATCCACCGAG
CCACCCGAATGGCATTTTGACAGAGTACACCTTAAAGTATCAGCCAATTAACAGCACACATGAATTAGGC
CCTCTGGTAGATTTGAAAATTCCTGCCAACAAGACACGGTGGACTTTAAAAAATTTAAATTTCAGCACTC
GATATAAGTTTTATTTCTATGCACAAACATCAGCAGGATCAGGAAGTCAAATTACAGAGGAAGCAGTAAC
AACTGTGGATGAAGCTGGTATTCTTCCACCTGATGTAGGTGCAGGCAAAGCGATGGCAAGCCGGCAGGTG
GATATTGCAACTCAGGGCTGGTTCATTGGTCTGATGTGTGCTGTTGCTCTCCTTATCTTAATTTTGCTGA
TTGTTTGCTTCATCAGAAGAAACAAGGGTGGTAAATATCCAGTTAAAGAAAAGGAAGATGCCCATGCTGA
CCCTGAAATCCAGCCTATGAAGGAAGATGATGGGACATTTGGAGAATACAGTGATGCAGAAGACCACAAG
CCTTTGAAAAAAGGAAGTCGAACTCCTTCAGACAGGACTGTGAAAAAAGAAGATAGTGACGACAGCCTAG
TTGACTATGGAGAAGGGGTTAATGGCCAGTTCAATGAGGATGGCTCCTTTATTGGACAATACAGTGGTAA
GAAAGAGAAAGAGCCGGCTGAAGGAAACGAAAGCTCAGAGGCACCTTCTCCTGTCAACGCCATGAATTCC
TTTGTTTAA

Translation (1192 aa):
MQLKIMPKKKRLSAGRVPLILFLCQMISALEVPLDPKLLEDLVQPPTITQQSPKDYIIDPRENIVIQCEA
KGKPPPSFSWTRNGTHFDIDKDPLVTMKPGTGTLIINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVR
PSRSPLWTKEKLEPITLQSGQSLVLPCRPPIGLPPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPE
DTREDYICYARFNHTQTIQQKQPISVKVISAKSSRERPPTFLTPEGNASNKEELRGNVLSLECIAEGLPT
PIIYWAKEDGMLPKNRTVYKNFEKTLQIIHVSEADSGNYQCIAKNALGAIHHTISVRVKAAPYWITAPQN
LVLSPGEDGTLICRANGNPKPRISWLTNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYG
YLLANAFVNVLAEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHENGT
LEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDPTWIVKQPEYAVVQRGSMVSFECKVKHDHTLSLTV
LWLKDNRELPSDERFTVDKDHLVVADVSDDDSGTYTCVANTTLDSVSASAVLSVVAPTPTPAPVYDVPNP
PFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEVSGTQTTAQLKLSPYVNYSF
RVMAVNSIGKSLPSEASEQYLTKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQK
DGDDEWTSVVVANVSKYIVSGTPTFVPYLIKVQALNDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNVVNS
TLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLNVR
VVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVNPTLDSLTLEWDPPSHPNGILTEYTLKYQPINSTHELG
PLVDLKIPANKTRWTLKNLNFSTRYKFYFYAQTSAGSGSQITEEAVTTVDEAGILPPDVGAGKAMASRQV
DIATQGWFIGLMCAVALLILILLIVCFIRRNKGGKYPVKEKEDAHADPEIQPMKEDDGTFGEYSDAEDHK
PLKKGSRTPSDRTVKKEDSDDSLVDYGEGVNGQFNEDGSFIGQYSGKKEKEPAEGNESSEAPSPVNAMNS
FV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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