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Report for CCDS53833.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
53833.1 Public Homo sapiens 12 PHETA1 24 110 108 CCDS HistoryNCBI Gene:144717Re-query CCDS DB by CCDS ID:53833.1Re-query CCDS DB by GeneID:144717See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 53833.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000361483.4 ENSP00000354461.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000361483.4Link to Ensembl Protein Viewer:ENSP00000354461.3Re-query CCDS DB by Nucleotide ID:ENST00000361483Re-query CCDS DB by Protein ID:ENSP00000354461
Original member Current member NCBI NM_001177996.3 NP_001171467.1 Accepted alive Link to Nucleotide Sequence:NM_001177996.3Link to Protein Sequence:NP_001171467.1Re-query CCDS DB by Nucleotide ID:NM_001177996Re-query CCDS DB by Protein ID:NP_001171467Link to BLAST:NP_001171467.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001171467.1 262 Q8N4B1-4 262 100% 0 0

Chromosomal Locations for CCDS 53833.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 111362678 111363463 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 111365564 111365566 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (789 nt):
ATGGCCCCAGGCTCCCCTCCAGGCCCCGCGATTGCCACCATGAAGCTGAACGAGCGCAGCCTGGCCTTCT
ACGCCACCTGTGACGCCCCGGTGGACAATGCAGGCTTCCTGTACAAGAAGGGTGGGCGGCACGCGGCCTA
CCACCGGCGCTGGTTCGTGCTGCGCGGGAACATGCTCTTCTACTTCGAGGACGCTGCCAGCCGTGAGCCC
GTGGGCGTCATCATCCTGGAGGGCTGCACTGTGGAGCTGGTGGAGGCCGCCGAGGAGTTCGCCTTCGCTG
TGCGCTTTGCGGGGACCCGGGCGCGCACCTACGTGCTGGCCGCTGAGAGTCAGGATGCCATGGAGGGCTG
GGTCAAGGCCCTGTCGCGTGCCAGCTTCGACTACCTGCGGCTGGTGGTGCGCGAGCTGGAGCAGCAGCTG
GCGGCTGTACGTGGCGGGGGTGGCATGGCCCTGCCCCAGCCCCAGCCCCAGTCCCTGCCCTTGCCCCCGT
CCCTGCCCTCTGCCCTGGCCCCAGTCCCATCCCTGCCTTCTGCCCCAGCCCCGGTCCCAGCCCTGCCCCT
GCCCCGCCGGCCCAGTGCCCTCCCGCCCAAGGAGAATGGCTGCGCTGTCTGGAGCACTGAGGCCACCTTC
AGGCCTGGACCCGAGCCCCCTCCACCACCGCCTCGCCGCCGGGCCTCGGCACCCCACGGGCCCCTGGACA
TGGCCCCCTTCGCCCGGCTGCACGAGTGCTATGGCCAGGAGATCCGGGCCCTGCGTGGCCAGTGGCTCAG
CAGCCGGGTCCAGCCCTGA

Translation (262 aa):
MAPGSPPGPAIATMKLNERSLAFYATCDAPVDNAGFLYKKGGRHAAYHRRWFVLRGNMLFYFEDAASREP
VGVIILEGCTVELVEAAEEFAFAVRFAGTRARTYVLAAESQDAMEGWVKALSRASFDYLRLVVRELEQQL
AAVRGGGGMALPQPQPQSLPLPPSLPSALAPVPSLPSAPAPVPALPLPRRPSALPPKENGCAVWSTEATF
RPGPEPPPPPPRRRASAPHGPLDMAPFARLHECYGQEIRALRGQWLSSRVQP


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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