NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS53774.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
53774.1 Public Homo sapiens 12 KIF21A 24 110 108 CCDS HistoryNCBI Gene:55605Re-query CCDS DB by CCDS ID:53774.1Re-query CCDS DB by GeneID:55605See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 53774.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000541463.6 ENSP00000438075.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000541463.6Link to Ensembl Protein Viewer:ENSP00000438075.2Re-query CCDS DB by Nucleotide ID:ENST00000541463Re-query CCDS DB by Protein ID:ENSP00000438075
Original member Current member NCBI NM_001173465.2 NP_001166936.1 Accepted alive Link to Nucleotide Sequence:NM_001173465.2Link to Protein Sequence:NP_001166936.1Re-query CCDS DB by Nucleotide ID:NM_001173465Re-query CCDS DB by Protein ID:NP_001166936Link to BLAST:NP_001166936.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001166936.1 1621 Q7Z4S6-6 1621 100% 0 0

Chromosomal Locations for CCDS 53774.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 39294424 39294517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 39301480 39301679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 39302965 39303135 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 39304821 39304938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 39307565 39307729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 39309586 39309766 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 39311417 39311553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 39318073 39318201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 39319906 39320013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 39322668 39322882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 39325839 39325893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 39326264 39326324 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 39330242 39330262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 39330746 39330911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 39331690 39331791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 39332214 39332408 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 39332591 39332744 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 39332893 39333107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 39337096 39337203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 39340165 39340364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 39340906 39341094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 39341505 39341622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 39342034 39342124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 39351777 39351980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 39356832 39356895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 39357248 39357437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 39358178 39358373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 39363098 39363213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 39366350 39366517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 39367030 39367164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 39367883 39368032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 39369729 39369911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 39370039 39370261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 39442927 39442970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4866 nt):
ATGTTGGGCGCCCCGGACGAGAGCTCCGTGCGGGTGGCTGTCAGAATAAGACCACAGCTTGCCAAAGAGA
AGATTGAAGGATGCCATATTTGTACATCTGTCACACCAGGAGAGCCTCAGGTCTTCCTAGGGAAAGATAA
GGCTTTTACTTTTGACTATGTATTTGACATTGACTCCCAGCAAGAGCAGATCTACATTCAATGTATAGAA
AAACTAATTGAAGGTTGCTTTGAAGGATACAATGCTACAGTTTTTGCTTATGGACAAACTGGAGCTGGTA
AAACATACACAATGGGAACAGGATTTGATGTTAACATTGTTGAGGAAGAACTGGGTATTATTTCTCGAGC
TGTTAAACACCTTTTTAAGAGTATTGAAGAAAAAAAACACATAGCAATTAAAAATGGGCTTCCTGCTCCA
GATTTTAAAGTGAATGCCCAATTCTTAGAGCTCTATAATGAAGAGGTCCTTGACTTATTTGATACCACTC
GTGATATTGATGCAAAAAGTAAAAAATCAAATATAAGAATTCATGAAGATTCAACTGGAGGAATTTATAC
TGTGGGCGTTACAACACGTACTGTGAATACAGAATCAGAGATGATGCAGTGTTTGAAGTTGGGTGCTTTA
TCCCGGACAACTGCCAGTACCCAGATGAATGTTCAGAGCTCTCGTTCACATGCCATTTTTACCATTCATG
TGTGTCAAACCAGAGTGTGTCCCCAAATAGATGCTGACAATGCAACTGATAATAAAATTATTTCTGAATC
AGCACAGATGAATGAATTTGAAACCCTGACTGCAAAGTTCCATTTTGTTGATCTCGCAGGATCTGAAAGA
CTGAAGCGTACTGGAGCTACAGGCGAGAGGGCAAAAGAAGGCATTTCTATCAACTGTGGACTTTTGGCAC
TTGGCAATGTAATAAGTGCCTTGGGAGACAAGAGCAAGAGGGCCACACATGTCCCCTATAGAGATTCCAA
GCTAACAAGACTACTACAGGATTCCCTCGGGGGTAATAGCCAAACAATCATGATAGCATGTGTCAGCCCT
TCAGACAGAGACTTTATGGAAACGTTAAACACCCTGAAATACGCCAATCGAGCTAGAAATATCAAGAATA
AGGTGATGGTCAATCAGGACAGAGCTAGTCAGCAAATCAATGCACTTCGTAGTGAAATCACACGACTTCA
GATGGAGCTCATGGAGTACAAAACAGGTAAAAGAATAATTGACGAAGAGGGTGTGGAAAGCATCAATGAC
ATGTTTCATGAGAATGCTATGCTACAGACTGAAAATAATAACCTGCGTGTAAGAATTAAAGCCATGCAAG
AGACGGTTGATGCATTGAGGTCCAGAATTACACAGCTTGTTAGTGATCAGGCCAACCATGTTCTTGCCAG
AGCAGGTGAAGGAAATGAGGAGATTAGTAATATGATTCATAGTTATATAAAAGAAATCGAAGATCTCAGG
GCAAAATTATTAGAAAGTGAAGCAGTGAATGAGAACCTTCGAAAAAACTTGACAAGAGCCACAGCAAGAG
CGCCATATTTCAGCGGATCATCAACTTTTTCTCCTACCATACTATCCTCAGACAAAGAAACCATTGAAAT
TATAGACCTAGCAAAAAAAGATTTAGAGAAGTTGAAAAGAAAAGAAAAGAGGAAGAAAAAAAGTGTGGCT
GGTAAAGAGGATAATACAGACACTGACCAAGAGAAGAAAGAAGAAAAGGGTGTTTCGGAAAGAGAAAACA
ATGAATTAGAAGTGGAAGAAAGTCAAGAAGTGAGTGATCATGAGGATGAAGAAGAGGAGGAGGAGGAGGA
GGAAGATGACATTGATGGGGGTGAAAGTTCTGATGAATCAGATTCTGAATCAGATGAAAAAGCCAATTAT
CAAGCAGACTTGGCAAACATTACTTGTGAAATTGCAATTAAGCAAAAGCTGATTGATGAACTAGAAAACA
GCCAGAAAAGACTGCAGACTCTGAAAAAGCAGTATGAAGAGAAGCTAATGATGCTGCAACATAAAATTCG
GGATACTCAGCTTGAAAGAGACCAGGTGCTTCAAAACTTAGGCTCGGTAGAATCTTACTCAGAAGAAAAA
GCAAAAAAAGTTAGGTCTGAATATGAAAAGAAACTCCAAGCCATGAACAAAGAACTGCAGAGACTTCAAG
CAGCTCAAAAAGAACATGCAAGGTTGCTTAAAAATCAGTCTCAGTATGAAAAGCAATTGAAGAAATTGCA
GCAGGATGTGATGGAAATGAAAAAAACAAAGGTTCGCCTAATGAAACAAATGAAAGAAGAACAAGAGAAA
GCCAGACTGACTGAGTCTAGAAGAAACAGAGAGATTGCTCAGTTGAAAAAGGATCAACGTAAAAGAGATG
TTACGGCTCTTCGTCGGCAAGTAAGACCCATGTCAGATAAAGTGGCTGGGAAAGTTACTCGGAAGCTGAG
TTCATCTGATGCACCTGCTCAGGACACAGGTTCCAGTGCAGCTGCTGTCGAAACAGATGCATCAAGGACA
GGAGCCCAGCAGAAAATGAGAATTCCTGTGGCGAGAGTCCAGGCCTTACCAACGCCGGCAACAAATGGAA
ACAGGAAAAAATATCAGAGGAAAGGATTGACTGGCCGAGTGTTTATTTCCAAGACAGCTCGCATGAAGTG
GCAGCTCCTTGAGCGCAGGGTCACAGACATCATCATGCAGAAGATGACCATTTCCAACATGGAGGCAGAT
ATGAATAGACTCCTCAAGCAACGGGAGGAACTCACAAAAAGACGAGAGAAACTTTCAAAAAGAAGGGAGA
AGATAGTCAAGGAGAATGGAGAGGGAGATAAAAATGTGGCTAATATCAATGAAGAGATGGAGTCACTGAC
TGCTAATATCGATTACATCAATGACAGTATTTCTGATTGTCAGGCCAACATAATGCAGATGGAAGAAGCA
AAGGAAGAAGGTGAGACATTGGATGTTACTGCAGTCATTAATGCCTGCACCCTTACAGAAGCCCGATACC
TGCTAGATCACTTCCTGTCAATGGGCATCAATAAGGGTCTTCAGGCTGCCCAGAAAGAGGCTCAAATTAA
AGTACTGGAAGGTCGACTCAAACAAACAGAAATAACCAGTGCTACCCAAAACCAGCTCTTATTCCATATG
TTGAAAGAGAAGGCAGAATTAAATCCTGAGCTAGATGCTTTACTAGGCCATGCTTTACAAGATCTAGATA
GCGTACCATTAGAAAATGTAGAGGATAGTACTGATGAGGATGCTCCTTTAAACAGCCCAGGATCAGAAGG
AAGCACGCTGTCTTCAGATCTCATGAAGCTTTGTGGTGAAGTGAAACCTAAGAACAAGGCCCGAAGGAGA
ACCACCACTCAGATGGAATTGCTGTATGCAGATAGCAGTGAACTAGCTTCAGACACTAGTACAGGAGATG
CCTCCTTGCCTGGCCCTCTCACACCTGTTGCAGAAGGGCAAGAGATTGGAATGAATACAGAGACAAGTGG
TACTTCTGCTAGGGAAAAAGAGCTCTCTCCCCCACCTGGCTTACCTTCTAAGATAGGCAGCATTTCCAGG
CAGTCATCTCTATCAGAAAAAAAAATTCCAGAGCCTTCTCCTGTAACAAGGAGAAAGGCATATGAGAAAG
CAGAAAAATCAAAGGCCAAGGAACAAAAGCACTCAGATTCTGGAACTTCAGAGGCTAGTCTTTCACCTCC
TTCTTCCCCACCAAGCCGGCCCCGTAATGAACTGAATGTTTTTAATCGTCTTACTGTTTCTCAGGGAAAC
ACATCAGTTCAGCAGGATAAGGGCATAATCAACCCATTTCCTGCTTCAAAAGGAATCAGAGCTTTTCCAC
TTCAGTGTATTCACATAGCTGAAGGGCATACAAAAGCTGTGCTCTGTGTGGATTCTACTGATGATCTCCT
CTTCACTGGATCAAAAGATCGTACTTGTAAAGTATGGAATCTGGTGACTGGGCAGGAAATAATGTCACTG
GGGGGTCATCCCAACAATGTCGTGTCTGTAAAATACTGTAATTATACCAGTTTGGTCTTCACTGTATCAA
CATCTTATATTAAGGTGTGGGATATCAGAGATTCAGCAAAGTGCATTCGAACACTAACGTCTTCAGGTCA
AGTTACTCTTGGAGATGCTTGTTCTGCAAGTACCAGTCGAACAGTAGCTATTCCTTCTGGAGAGAACCAG
ATCAATCAAATTGCCCTAAACCCAACTGGCACCTTCCTCTATGCTGCTTCTGGAAATGCTGTCAGGATGT
GGGATCTTAAAAGGTTTCAGTCTACAGGAAAGTTAACAGGACACCTAGGCCCTGTTATGTGCCTTACTGT
GGATCAGATTTCCAGTGGACAAGATCTAATCATCACTGGCTCCAAGGATCATTACATCAAAATGTTTGAT
GTTACAGAAGGAGCTCTTGGGACTGTGAGTCCCACCCACAATTTTGAACCCCCTCATTATGATGGCATAG
AAGCACTAACCATTCAAGGGGATAACCTATTTAGTGGGTCTAGAGATAATGGAATCAAGAAATGGGACTT
AACTCAAAAAGACCTTCTTCAGCAAGTTCCAAATGCACATAAGGATTGGGTCTGTGCCCTGGGAGTGGTG
CCAGACCACCCAGTTTTGCTCAGTGGCTGCAGAGGGGGCATTTTGAAAGTCTGGAACATGGATACTTTTA
TGCCAGTGGGAGAGATGAAGGGTCATGATAGTCCTATCAATGCCATATGTGTTAATTCCACCCACATTTT
TACTGCAGCTGATGATCGAACTGTGAGAATTTGGAAGGCTCGCAATTTGCAAGATGGTCAGATCTCTGAC
ACAGGAGATCTGGGGGAAGATATTGCCAGTAATTAA

Translation (1621 aa):
MLGAPDESSVRVAVRIRPQLAKEKIEGCHICTSVTPGEPQVFLGKDKAFTFDYVFDIDSQQEQIYIQCIE
KLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIVEEELGIISRAVKHLFKSIEEKKHIAIKNGLPAP
DFKVNAQFLELYNEEVLDLFDTTRDIDAKSKKSNIRIHEDSTGGIYTVGVTTRTVNTESEMMQCLKLGAL
SRTTASTQMNVQSSRSHAIFTIHVCQTRVCPQIDADNATDNKIISESAQMNEFETLTAKFHFVDLAGSER
LKRTGATGERAKEGISINCGLLALGNVISALGDKSKRATHVPYRDSKLTRLLQDSLGGNSQTIMIACVSP
SDRDFMETLNTLKYANRARNIKNKVMVNQDRASQQINALRSEITRLQMELMEYKTGKRIIDEEGVESIND
MFHENAMLQTENNNLRVRIKAMQETVDALRSRITQLVSDQANHVLARAGEGNEEISNMIHSYIKEIEDLR
AKLLESEAVNENLRKNLTRATARAPYFSGSSTFSPTILSSDKETIEIIDLAKKDLEKLKRKEKRKKKSVA
GKEDNTDTDQEKKEEKGVSERENNELEVEESQEVSDHEDEEEEEEEEEDDIDGGESSDESDSESDEKANY
QADLANITCEIAIKQKLIDELENSQKRLQTLKKQYEEKLMMLQHKIRDTQLERDQVLQNLGSVESYSEEK
AKKVRSEYEKKLQAMNKELQRLQAAQKEHARLLKNQSQYEKQLKKLQQDVMEMKKTKVRLMKQMKEEQEK
ARLTESRRNREIAQLKKDQRKRDVTALRRQVRPMSDKVAGKVTRKLSSSDAPAQDTGSSAAAVETDASRT
GAQQKMRIPVARVQALPTPATNGNRKKYQRKGLTGRVFISKTARMKWQLLERRVTDIIMQKMTISNMEAD
MNRLLKQREELTKRREKLSKRREKIVKENGEGDKNVANINEEMESLTANIDYINDSISDCQANIMQMEEA
KEEGETLDVTAVINACTLTEARYLLDHFLSMGINKGLQAAQKEAQIKVLEGRLKQTEITSATQNQLLFHM
LKEKAELNPELDALLGHALQDLDSVPLENVEDSTDEDAPLNSPGSEGSTLSSDLMKLCGEVKPKNKARRR
TTTQMELLYADSSELASDTSTGDASLPGPLTPVAEGQEIGMNTETSGTSAREKELSPPPGLPSKIGSISR
QSSLSEKKIPEPSPVTRRKAYEKAEKSKAKEQKHSDSGTSEASLSPPSSPPSRPRNELNVFNRLTVSQGN
TSVQQDKGIINPFPASKGIRAFPLQCIHIAEGHTKAVLCVDSTDDLLFTGSKDRTCKVWNLVTGQEIMSL
GGHPNNVVSVKYCNYTSLVFTVSTSYIKVWDIRDSAKCIRTLTSSGQVTLGDACSASTSRTVAIPSGENQ
INQIALNPTGTFLYAASGNAVRMWDLKRFQSTGKLTGHLGPVMCLTVDQISSGQDLIITGSKDHYIKMFD
VTEGALGTVSPTHNFEPPHYDGIEALTIQGDNLFSGSRDNGIKKWDLTQKDLLQQVPNAHKDWVCALGVV
PDHPVLLSGCRGGILKVWNMDTFMPVGEMKGHDSPINAICVNSTHIFTAADDRTVRIWKARNLQDGQISD
TGDLGEDIASN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH