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Report for CCDS52141.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
52141.1 |
Public |
Mus musculus |
7 |
Arhgef1 |
23 |
108 |
98 |
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Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 52141.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000047873.15 |
ENSMUSP00000046469.9 |
Accepted |
alive |
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EBI |
ENSMUST00000117419.7 |
ENSMUSP00000113366.1 |
Accepted |
alive |
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NCBI |
NM_001130152.1 |
NP_001123624.1 |
Updated |
not alive |
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NCBI |
NM_001130152.2 |
NP_001123624.1 |
Accepted |
alive |
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NCBI |
NM_001130153.1 |
NP_001123625.1 |
Updated |
not alive |
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NCBI |
NM_001130153.2 |
NP_001123625.1 |
Accepted |
alive |
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Chromosomal Locations for CCDS 52141.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2763 nt): ATGGGAGAAGTCGCCGGAGGGGCGGCCCCAGGGCCTCCCCGGTCTGGCCTGGTGTCCATCATCATCGGGG CGGAGGATGAGGATTTTGAGAACGAGCTGGAGGCGAACTCAGAAGATCAAAACAGCCAGTTCCAGAGCCT AGAGCAAGTGAAGCGCCGCCCTGCCCACCTCATGGCCCTCCTGCAGCATGTGGCCCTGCAGTTCGAGCCA GGACCACTGCTCTGCTGCCTGCATGCAGACATGCTGAGCTCTCTGGGCCCCAAAGAAGCCAAGAAGGCCT TCCTTGACTTCTATCACAGTTTCCTGGAGAAGACTGCGGTTCTACGGGTGCCGGTCCCTCCCAGTGTCGC TTTTGAACTTGATCGTACTCGACCTGATCTGATCTCTGAGGATGTCCAGAGGCGGTTCATACAAGAGGTG GTGCAGAGCCAGCAGGCAGCCGTGAGCCGTCAGCTAGAGGACTTCCGCTCCAAGCGGCTCATGGGCATGA CGCCCTGGGAGCAGGAACTGAGCCTGCTGGAGCCCTGGATTGGGAAAGACCGAGGCAACTATGAGGCCCG GGAGCGGCATGTTGCGGAGCGGCTGCTGTCCCACCTGGAGGAGACCCAGCATACCATCTCTACAGATGAA GAGAAAAGTGCTGCTGTGGTCACTGCCATCAGCCTGTATATGCGCCACCTTGGAGTCCGGACCAAGAGTG GGGACAAGAAGTCGGGAAGGAACTTCTTCCGGAAAAAGGTGATGGGGAATCGGAGGTCAGACGAACCCCC AAAGACAAAGAAAGGGCTGAGCAGTATCCTAGATCCTGCACGTTGGAACCGGGGAGAGCCATCCGCTCCA GATTGTCGACATCTAAAGGTCGAGGCTGATGCAGAGAAGCCAGGCCCTGCAGACCGGAAGGGAGGCCTGG GTATGTCTTCTCGGGACAGGACTGTTGGGACTCCTGGACAGGACAACCCAGGAGTCTCCCTGCACCCTCT GTCTACAGACAGCGTCGACTCCCGGGAACCAGGCGTGGATACCCCGCAGGAGCCAGGGGATACACCCCCA CAGGGCCCTACCAGCCTGGAGCCCCTGGCGCCCCCAGAGAGCACAGAGGACAATGGCGAGACTGAGAGCC CTGAGCCCGGAGATGATGGGGAGCCAGGACGGTCAGGCCTGGAACTGGAACCAGAAGAACCTCCTGGGTG GAGGGAACTCGTGCCCCCAGACACCCTGCTCAGTCTGCCCAAGAGCCAAGTGAAGCGGCAAGAGGTCATC AGCGAGCTGCTCGTGACTGAGGCAGCTCACGTGCGCATGCTACGGGTACTGCATGACCTCTTCTACCAGC CCATGGCGGATGGAGGCTTCTTCCCTCTGGACGAGCTGCAGAACATCTTCCCGAGCCTGGATGAGCTCAT CGAGGTGCACTCCCTGTTCCTCGATCGCTTGATGAAGCGGAGACAAGAGAGTGGCTACCTCATTGAGGAG ATCGGCGATGTGCTACTGGCCCGGTTCGATGGTGCTGAGGGCTCATGGTTCCAGAAGATCTCCTCCCGCT TCTGCAGCCGCCAGTCGTTCGCTCTAGAGCAGCTCAAAGCCAAGCAGCGCAAGGAGCCTCGGTTCTGTGC CTTTGTGCAGGAAGCTGAGAGCCGCCCGAGATGCCGGCGCCTACAGTTAAAGGACATGATCCCCACTGAG ATGCAGCGACTGACCAAGTACCCACTGCTGCTACAGAGCATCGGGCAGAACACAGAGGAGTCTACAGAAC GAGGGAAAGTGGAGCTTGCAGCTGAGTGCTGCCGGGAGATTCTGCACCATGTCAATCAAGCCGTCCGTGA CATGGAGGACCTGCTGCGGCTCAAGGATTACCAGCGGCGCCTGGACTTGACTCACCTACGGCAGAGCAGT GACCCTATGCTGAGCGAGTTCAAGAACCTGGACATCACTAAGAAGAAGTTGGTCCATGAAGGCCCCCTCA CGTGGCGAGTGACCAAAGACAAAGCTATAGAAGTGCACGTGCTCTTGCTGGACGACCTGCTGCTGCTGCT CCAGCGCCAGGACGAGAGGCTGCTGCTCAAGTCCCACAGCCGGACGCTGACACCTACCCCCGATGGCAAG ACCATGCTGCGGCCGGTGCTCCGGCTCACCTCTGCCATGACCCGAGAGGTGGCCACTGATCACAAAGCTT TCTACGTCATTTTTACCTGGGACCAGGAGGCCCAGATATATGAGCTGGTGGCACAGACATCTTCGGAACG CAAAAACTGGTGTAACCTCATCACTGAGACTGCTGGATCCCTGAAGGTCCCTGCCCCTGCCTCCCGCCTC AAACCCCGGCCCAGCCCAAGCAGCATCCGAGAACCCCTGCTCAGCAGCTCTGAGAATGGCACTGGAGGCG CAGAGATGGCTCCAGCTGATGCCAGGACAGAGCGGCTCCTCAATGACCTCCTGCCCTTCTGCAGACCAGG CCCAGAGGGCCAGCTTGCTGCCACAGCCCTTCAGAAAGTACTGTCCCTGAAGCAGATCCTGCTAAGCACT GAGGAAGACAGTGGAGCGGGGCCTCCCCGCGATGGGGATGGGGTGCCTGGTGGTAGGGCCCCCGGCCCAG TGCACACCCAGGAGATTGAGGAAAACTTGCTTAGCTTAGAGGTGGCCATCAGACAACTGGAGGAGTTGGA AGAGGAATTTTGTCGCCTAAGACCCCTCCTGTCCCAGCTTGGGGGGACTCTGTCCCCCAACCTGGCTGCA CCTGAACGCTCTGCTCAGACAGGCCTTTCATGA
Translation (920 aa): MGEVAGGAAPGPPRSGLVSIIIGAEDEDFENELEANSEDQNSQFQSLEQVKRRPAHLMALLQHVALQFEP GPLLCCLHADMLSSLGPKEAKKAFLDFYHSFLEKTAVLRVPVPPSVAFELDRTRPDLISEDVQRRFIQEV VQSQQAAVSRQLEDFRSKRLMGMTPWEQELSLLEPWIGKDRGNYEARERHVAERLLSHLEETQHTISTDE EKSAAVVTAISLYMRHLGVRTKSGDKKSGRNFFRKKVMGNRRSDEPPKTKKGLSSILDPARWNRGEPSAP DCRHLKVEADAEKPGPADRKGGLGMSSRDRTVGTPGQDNPGVSLHPLSTDSVDSREPGVDTPQEPGDTPP QGPTSLEPLAPPESTEDNGETESPEPGDDGEPGRSGLELEPEEPPGWRELVPPDTLLSLPKSQVKRQEVI SELLVTEAAHVRMLRVLHDLFYQPMADGGFFPLDELQNIFPSLDELIEVHSLFLDRLMKRRQESGYLIEE IGDVLLARFDGAEGSWFQKISSRFCSRQSFALEQLKAKQRKEPRFCAFVQEAESRPRCRRLQLKDMIPTE MQRLTKYPLLLQSIGQNTEESTERGKVELAAECCREILHHVNQAVRDMEDLLRLKDYQRRLDLTHLRQSS DPMLSEFKNLDITKKKLVHEGPLTWRVTKDKAIEVHVLLLDDLLLLLQRQDERLLLKSHSRTLTPTPDGK TMLRPVLRLTSAMTREVATDHKAFYVIFTWDQEAQIYELVAQTSSERKNWCNLITETAGSLKVPAPASRL KPRPSPSSIREPLLSSSENGTGGAEMAPADARTERLLNDLLPFCRPGPEGQLAATALQKVLSLKQILLST EEDSGAGPPRDGDGVPGGRAPGPVHTQEIEENLLSLEVAIRQLEELEEEFCRLRPLLSQLGGTLSPNLAA PERSAQTGLS
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