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Report for CCDS49911.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49911.1 Public Mus musculus 16 Dnajc28 23 108 98 CCDS HistoryNCBI Gene:246738Re-query CCDS DB by CCDS ID:49911.1Re-query CCDS DB by GeneID:246738See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 49911.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000049244.9 ENSMUSP00000048113.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000049244.9Link to Ensembl Protein Viewer:ENSMUSP00000048113.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000049244Re-query CCDS DB by Protein ID:ENSMUSP00000048113
Original member Current member NCBI NM_138664.2 NP_619605.2 Accepted alive Link to Nucleotide Sequence:NM_138664.2Link to Protein Sequence:NP_619605.2Re-query CCDS DB by Nucleotide ID:NM_138664Re-query CCDS DB by Protein ID:NP_619605Link to BLAST:NP_619605.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_619605.2 385 Q8VCE1 385 100% 0 0

Chromosomal Locations for CCDS 49911.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 16 (NC_000082.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 91616197 91617354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1158 nt):
ATGATAAACACAGTGTGCATGAAGACCACTCGGATCTTGAGACTGCACCTAACAAACGCTTCCTTGATTC
CTCCTGGTATAAAAATGCTTTCAGACCCCAGATCCAGGATGATATCAACCCATGAATCCCAGAAGCTGAG
AGAATATTACAGGCTGCTGAATCTGGATGAAGGATGCTCTGTAGACGACGTCAGGGAGTCTTTTCACAAG
CTCGCCAGGCAGTACCACCCAGACAGCGGTTCTAGTGATGCTGACTCTGCAACATTTATAAAGATTGAAG
AGGCTTACAGGAATGTGCTGTCCCATGCGATAAAACGGATGCATGCCGGACAGGATAAAGCTGAAGATGC
AGCAGAAGATGAAGAAGAAGGAAAGTTCAAATACAACACACCTCAGCACCGACATTACTTAAGCTTCGAA
GGTGTCGGCTTTGGGACCCCCAGCCAGCGAGAGAAACAATACAGGCAGTTCAGGGCGGATCGCGCGACGG
AGCAGGTGATGGAATACCAAAGGCAGAAGCTTCAGAGGGAGTTCTTCGCCAACAGCATAACTGTCAAGGA
CGTACGGCAGAGCAAGCAACAGAAGATAACTCAAGCCATCGAGCGCCTGGTGGAGGACCTCATTCAGGAA
TCCATGGCAAAAGGAGACTTTGACAATCTCAGCGGGAAAGGAAAACCGCTGAAGAAATTTTCTGGCTGCT
CATATATTGATCCCATGACTCACAACCTGAACCGAATATTGATAGATAATGGATACCAACCAGAGTGGAT
CCTGATGCAGAAGGAGATTAAGGACACCATCGAGCAACTCCGAGAAGCGCTTTTAATGTCTAGGAAGAAG
CTGGGGAACCCTCTGTCACCCACAGAGCAGAAACAGTGGGCCCAAGTGTGTGAGCAGTTTCAAGAAAAGA
TACGAAAGCTGAACAAGCGAATTAATGATTTCAACTTAATTGTTCCCATCCTGACCAGGCAGAAAGTCCA
TTTTGACGCACAGAAAGAAATTATCAGAGTCCAAGAAATGTACGGGGCCTTCGTAGAAGCAAACGAAGTC
ACAGAAGAAAACCAAACTGACGTTAGCCAGGGAGAAGAATCAAAAACACCCAGAGTCAAGGCAGGCTTTC
TAAACTGGCTAAATCTGTGGAAATCTATTAAAATATGA

Translation (385 aa):
MINTVCMKTTRILRLHLTNASLIPPGIKMLSDPRSRMISTHESQKLREYYRLLNLDEGCSVDDVRESFHK
LARQYHPDSGSSDADSATFIKIEEAYRNVLSHAIKRMHAGQDKAEDAAEDEEEGKFKYNTPQHRHYLSFE
GVGFGTPSQREKQYRQFRADRATEQVMEYQRQKLQREFFANSITVKDVRQSKQQKITQAIERLVEDLIQE
SMAKGDFDNLSGKGKPLKKFSGCSYIDPMTHNLNRILIDNGYQPEWILMQKEIKDTIEQLREALLMSRKK
LGNPLSPTEQKQWAQVCEQFQEKIRKLNKRINDFNLIVPILTRQKVHFDAQKEIIRVQEMYGAFVEANEV
TEENQTDVSQGEESKTPRVKAGFLNWLNLWKSIKI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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