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Report for CCDS45216.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45216.1 Public Homo sapiens 15 CDIN1 24 110 108 CCDS HistoryNCBI Gene:84529Re-query CCDS DB by CCDS ID:45216.1Re-query CCDS DB by GeneID:84529See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45216.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000338183.8 ENSP00000342433.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000338183.8Link to Ensembl Protein Viewer:ENSP00000342433.4Re-query CCDS DB by Nucleotide ID:ENST00000338183Re-query CCDS DB by Protein ID:ENSP00000342433
Original member Current member EBI ENST00000567389.5 ENSP00000456736.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000567389.5Link to Ensembl Protein Viewer:ENSP00000456736.1Re-query CCDS DB by Nucleotide ID:ENST00000567389Re-query CCDS DB by Protein ID:ENSP00000456736
Original member Current member EBI ENST00000562877.5 ENSP00000457854.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000562877.5Link to Ensembl Protein Viewer:ENSP00000457854.1Re-query CCDS DB by Nucleotide ID:ENST00000562877Re-query CCDS DB by Protein ID:ENSP00000457854
Original member Current member NCBI NM_001290232.2 NP_001277161.1 Accepted alive Link to Nucleotide Sequence:NM_001290232.2Link to Protein Sequence:NP_001277161.1Re-query CCDS DB by Nucleotide ID:NM_001290232Re-query CCDS DB by Protein ID:NP_001277161Link to BLAST:NP_001277161.1
Original member Current member NCBI NM_001321756.2 NP_001308685.1 Accepted alive Link to Nucleotide Sequence:NM_001321756.2Link to Protein Sequence:NP_001308685.1Re-query CCDS DB by Nucleotide ID:NM_001321756Re-query CCDS DB by Protein ID:NP_001308685Link to BLAST:NP_001308685.1
Original member Current member NCBI NM_032499.6 NP_115888.1 Accepted alive Link to Nucleotide Sequence:NM_032499.6Link to Protein Sequence:NP_115888.1Re-query CCDS DB by Nucleotide ID:NM_032499Re-query CCDS DB by Protein ID:NP_115888Link to BLAST:NP_115888.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001277161.1 183 Q9Y2V0-2 183 100% 0 0
NP_001308685.1 183 Q9Y2V0-2 183 100% 0 0
NP_115888.1 183 Q9Y2V0-2 183 100% 0 0

Chromosomal Locations for CCDS 45216.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 36657854 36657905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 36691685 36691764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 36692126 36692175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 36697323 36697390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 36709223 36709288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 36709856 36709961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 36808324 36808453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (552 nt):
ATGGCTCGGCTTATACTGGAGAGGTTTCTACAGGAACACGAGGAAACTCCACCCTCCAAGTCTATTATAA
ATAGTATGCTACGGGACCCTTCTCAGATTCCAGATGGAGTTCTAGCAAATCAGGTCTATCAGTGCATTGT
GAACGACTGCTGTTACGGACCACTAGTGGACTGCATCAAGCATGCCATTGGTCATGAGCATGAGGTCCTG
CTGAGAGACTTGCTTCTAGAGAAAAACCTGTCCTTCCTAGATGAAGATCAGCTTCGTGCAAAGGGTTATG
ACAAAACACCAGACTTCATTTTACAAGTACCAGTTGCTGTAGAAGGGCACATAATTCACTGGATTGAAAG
CAAAGCCTCATTTGGTGATGAATGTAGCCACCACGCCTACCTGCATGACCAGTTCTGGAGCTACTGGAAT
AGATTTGGGCCAGGCTTAGTCATCTATTGGTATGGATTTATCCAGGAGCTGGACTGCAACCGGGAAAGGG
GCATCCTGCTCAAAGCCTGTTTCCCCACGAACATTGTCACCTTATGCCACAGCATAGCTTGA

Translation (183 aa):
MARLILERFLQEHEETPPSKSIINSMLRDPSQIPDGVLANQVYQCIVNDCCYGPLVDCIKHAIGHEHEVL
LRDLLLEKNLSFLDEDQLRAKGYDKTPDFILQVPVAVEGHIIHWIESKASFGDECSHHAYLHDQFWSYWN
RFGPGLVIYWYGFIQELDCNRERGILLKACFPTNIVTLCHSIA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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