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Report for CCDS44497.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44497.1 Public Homo sapiens 10 PWWP2B 24 110 108 CCDS HistoryNCBI Gene:170394Re-query CCDS DB by CCDS ID:44497.1Re-query CCDS DB by GeneID:170394See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44497.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000631148.2 ENSP00000486501.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000631148.2Link to Ensembl Protein Viewer:ENSP00000486501.1Re-query CCDS DB by Nucleotide ID:ENST00000631148Re-query CCDS DB by Protein ID:ENSP00000486501
Original member Current member NCBI NM_001098637.2 NP_001092107.1 Accepted alive Link to Nucleotide Sequence:NM_001098637.2Link to Protein Sequence:NP_001092107.1Re-query CCDS DB by Nucleotide ID:NM_001098637Re-query CCDS DB by Protein ID:NP_001092107Link to BLAST:NP_001092107.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001092107.1 499 Q6NUJ5-2 499 100% 0 0

Chromosomal Locations for CCDS 44497.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 132397227 132397351 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 132404626 132405986 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 132417061 132417074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1500 nt):
ATGGAGCCGCGCGCCGGCTGCCGGCTGCCGGTGCGGGTGGAGCAGGTCGTCAACGGCGCGCTGGTGGTCA
CGGTGAGCTGCGGCGAGCGGAGCTTCGCGGGGATCCTGCTGGACTGCACGAAAAAGTCCGGCCTCTTTGG
CCTACCCCCGTTGGCTCCGCTGCCCCAGGTCGATGAGTCCCCTGTCAACGACAGCCATGGCCGGGCTCCC
GAGGAGGGGGATGCAGAGGTGATGCAGCTGGGGTCCAGCTCCCCCCCTCCTGCCCGCGGGGTTCAGCCCC
CCGAGACCACCCGCCCCGAGCCACCCCCGCCCCTCGTGCCGCCGCTGCCCGCCGGAAGCCTGCCCCCGTA
CCCTCCCTACTTCGAAGGCGCCCCCTTCCCTCACCCGCTGTGGCTCCGGGACACGTACAAGCTGTGGGTG
CCCCAGCCGCCGCCCAGGACCATCAAGCGCACGCGGCGGCGTCTGTCCCGCAACCGCGACCCGGGGCGCC
TCATCCTCAGCACCATCCGCCTGCGGCCGCGCCAGGTGCTCTGTGAGAAGTGCAAGAGCACGCTGAGCCC
CCCGGAGGCCAGCCCCGGACCCCCAGCCGCGCCCAGGGCCCGCAGGAGGCTGGGCAGCGGCCCGGACAGG
GAGCTCCGCAAGCCGGAGGAGCCGGAGAACGGCGAGCCCACGGCTGCGGCCACCGCCAGGAGGAGCAAGA
GGGAGAGGCGCGAGGAGGACAGGGCCCCGGCAGAGCAGGTCCCGCGGAGCCCGGTCATCAAGATCTCCTA
CAGCACGCCCCAGGGCAAGGGAGAGGTGGTCAAGATCCCCTCCCGCGTGCACGGCTCTCTGGAGCCCTTC
CGTCCCCAGCAGGCCCCGCAGGACGACGGCAGCCAGGACCCCGAGGTGCTGGACAGAGAGTCCCGGGACC
GGCCGTCCTGCGCGCCCTCGGCCTCCATCCCCAAGTTGAAACTGACACGGCCTGTGCCGGCCGGCGCGGA
CCTGCCGCCCCCTAAGATCCGCCTGAAGCCCCACCGTCTGGGGGACAGCGAGCACGAGCCCGTGTACCGG
GCCGAGCTGGTGGGGGAGCTGAACGGGTACCTGCGGGACAGCTCGCCGGCGCCCTGTGCGGACGGCCCTG
CCGGTGGGCTGGCGGACTTGTCTTCTGGAAGTTCGGGTGAGGACGATGACTTCAAGAGCTGTCCCCAGGG
TCCACAGGGACGCGAGGGCTTGGCTTTTCTCGTCAGCTGCCCTGAGGGGAGAGCGGACTGTGCCAGTGAG
TCGGCGTGCAGCAGCGACAGCCTGGACGAGGCCAGATCGTCCGGCTCGGAAGGGACGCCGGCAGACACGG
GTGACCTCTCGCCTGGCCACGGCGCGTCAGCGCCCTCGGTGTCCAGAGAGGCTCGCCAAACGGTGCCGCC
CCTGACGGTCAGGCTGCACACACAGAGCGTGTCGGAGTGCATCACGGAGGACGGCAGGACTGTGGCCGTG
GGGGACATCGTCTGGGGTCACCGACGATGA

Translation (499 aa):
MEPRAGCRLPVRVEQVVNGALVVTVSCGERSFAGILLDCTKKSGLFGLPPLAPLPQVDESPVNDSHGRAP
EEGDAEVMQLGSSSPPPARGVQPPETTRPEPPPPLVPPLPAGSLPPYPPYFEGAPFPHPLWLRDTYKLWV
PQPPPRTIKRTRRRLSRNRDPGRLILSTIRLRPRQVLCEKCKSTLSPPEASPGPPAAPRARRRLGSGPDR
ELRKPEEPENGEPTAAATARRSKRERREEDRAPAEQVPRSPVIKISYSTPQGKGEVVKIPSRVHGSLEPF
RPQQAPQDDGSQDPEVLDRESRDRPSCAPSASIPKLKLTRPVPAGADLPPPKIRLKPHRLGDSEHEPVYR
AELVGELNGYLRDSSPAPCADGPAGGLADLSSGSSGEDDDFKSCPQGPQGREGLAFLVSCPEGRADCASE
SACSSDSLDEARSSGSEGTPADTGDLSPGHGASAPSVSREARQTVPPLTVRLHTQSVSECITEDGRTVAV
GDIVWGHRR


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 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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