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Report for CCDS41439.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41439.1 Public Homo sapiens 1 PAPPA2 24 110 108 CCDS HistoryNCBI Gene:60676Re-query CCDS DB by CCDS ID:41439.1Re-query CCDS DB by GeneID:60676See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41439.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000367661.7 ENSP00000356633.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000367661.7Link to Ensembl Protein Viewer:ENSP00000356633.3Re-query CCDS DB by Nucleotide ID:ENST00000367661Re-query CCDS DB by Protein ID:ENSP00000356633
Original member Current member NCBI NM_021936.3 NP_068755.2 Accepted alive Link to Nucleotide Sequence:NM_021936.3Link to Protein Sequence:NP_068755.2Re-query CCDS DB by Nucleotide ID:NM_021936Re-query CCDS DB by Protein ID:NP_068755Link to BLAST:NP_068755.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_068755.2 827 Q9BXP8-2 827 100% 0 0

Chromosomal Locations for CCDS 41439.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 176556323 176557241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176594524 176595595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176670970 176671115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176690137 176690483 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2484 nt):
ATGATGTGCTTAAAGATCCTAAGAATAAGCCTGGCGATTTTGGCTGGGTGGGCACTCTGTTCTGCCAACT
CTGAGCTGGGCTGGACACGCAAGAAATCCTTGGTTGAGAGGGAACACCTGAATCAGGTGCTGTTGGAAGG
AGAACGTTGTTGGCTGGGGGCCAAGGTTCGAAGACCCAGAGCTTCTCCACAGCATCACCTCTTTGGAGTC
TACCCCAGCAGGGCTGGGAACTACCTAAGGCCCTACCCCGTGGGGGAGCAAGAAATCCATCATACAGGAC
GCAGCAAACCAGACACTGAAGGAAATGCTGTGAGCCTTGTTCCCCCAGACCTGACTGAAAATCCAGCAGG
ACTGAGGGGTGCAGTTGAAGAGCCGGCTGCCCCATGGGTAGGGGATAGTCCTATTGGGCAATCTGAGCTG
CTGGGAGATGATGACGCTTATCTCGGCAATCAAAGATCCAAGGAGTCTCTAGGTGAGGCCGGGATTCAGA
AAGGCTCAGCCATGGCTGCCACTACTACCACCGCCATTTTCACAACCCTGAACGAACCCAAACCAGAGAC
CCAAAGGAGGGGCTGGGCCAAGTCCAGGCAGCGTCGCCAAGTGTGGAAGAGGCGGGCGGAAGATGGGCAG
GGAGACTCCGGTATCTCTTCACATTTCCAACCTTGGCCCAAGCATTCCCTTAAACACAGGGTCAAAAAGA
GTCCACCGGAGGAAAGCAACCAAAATGGTGGAGAGGGCTCCTACCGAGAAGCAGAGACCTTTAACTCCCA
AGTAGGACTGCCCATCTTATACTTCTCTGGGAGGCGGGAGCGGCTGCTGCTGCGTCCAGAAGTGCTGGCT
GAGATTCCCCGGGAGGCGTTCACAGTGGAAGCCTGGGTTAAACCGGAGGGAGGACAGAACAACCCAGCCA
TCATCGCAGGTGTGTTTGATAACTGCTCCCACACTGTCAGTGACAAAGGCTGGGCCCTGGGGATCCGCTC
AGGGAAGGACAAGGGAAAGCGGGATGCTCGCTTCTTCTTCTCCCTCTGCACCGACCGCGTGAAGAAAGCC
ACCATCTTGATTAGCCACAGTCGCTACCAACCAGGCACATGGACCCATGTGGCAGCCACTTACGATGGAC
GGCACATGGCCCTGTATGTGGATGGCACTCAGGTGGCTAGCAGTCTAGACCAGTCTGGTCCCCTGAACAG
CCCCTTCATGGCATCTTGCCGCTCTTTGCTCCTGGGGGGAGACAGCTCTGAGGATGGGCACTATTTCCGT
GGACACCTGGGCACACTGGTTTTCTGGTCGACCGCCCTGCCACAAAGCCATTTTCAGCACAGTTCTCAGC
ATTCAAGTGGGGAGGAGGAAGCGACTGACTTGGTCCTGACAGCGAGCTTTGAGCCTGTGAACACAGAGTG
GGTTCCCTTTAGAGATGAGAAGTACCCACGACTTGAGGTTCTCCAGGGCTTTGAGCCAGAGCCTGAGATT
CTGTCGCCTTTGCAGCCCCCACTCTGTGGGCAAACAGTCTGTGACAATGTGGAATTGATCTCCCAGTACA
ATGGATACTGGCCCCTTCGGGGAGAGAAGGTGATACGCTACCAGGTGGTGAACATCTGTGATGATGAGGG
CCTAAACCCCATTGTGAGTGAGGAGCAGATTCGTCTGCAGCACGAGGCACTGAATGAGGCCTTCAGCCGC
TACAACATCAGCTGGCAGCTGAGCGTCCACCAGGTCCACAATTCCACCCTGCGACACCGGGTTGTGCTTG
TGAACTGTGAGCCCAGCAAGATTGGCAATGACCATTGTGACCCCGAGTGTGAGCACCCACTCACAGGCTA
TGATGGGGGTGACTGCCGCCTGCAGGGCCGCTGCTACTCCTGGAACCGCAGGGATGGGCTCTGTCACGTG
GAGTGTAACAACATGCTGAACGACTTTGACGACGGAGACTGCTGCGACCCCCAGGTGGCTGATGTGCGCA
AGACCTGCTTTGACCCTGACTCACCCAAGAGGGCATACATGAGTGTGAAGGAGCTGAAGGAGGCCCTGCA
GCTGAACAGTACTCACTTCCTCAACATCTACTTTGCCAGCTCAGTGCGGGAAGACCTTGCAGGTGCTGCC
ACCTGGCCTTGGGACAAGGACGCTGTCACTCACCTGGGTGGCATTGTCCTCAGCCCAGCATATTATGGGA
TGCCTGGCCACACCGACACCATGATCCATGAAGTGGGACATGTTCTGGGACTCTACCATGTCTTTAAAGG
AGTCAGTGAAAGAGAATCCTGCAATGACCCCTGCAAGGAGACAGTGCCATCCATGGAAACGGGAGACCTC
TGTGCCGACACCGCCCCCACTCCCAAGAGTGAGCTGTGCCGGGAACCAGAGCCCACTAGTGACACCTGTG
GCTTCACTCGCTTCCCAGGGGCTCCGTTCACCAACTACATGAGCTACACGGGTATCACCACTGTCTTGTT
TTGTTTTCTGTTAAGAATACATGGGGGCCTTTGA

Translation (827 aa):
MMCLKILRISLAILAGWALCSANSELGWTRKKSLVEREHLNQVLLEGERCWLGAKVRRPRASPQHHLFGV
YPSRAGNYLRPYPVGEQEIHHTGRSKPDTEGNAVSLVPPDLTENPAGLRGAVEEPAAPWVGDSPIGQSEL
LGDDDAYLGNQRSKESLGEAGIQKGSAMAATTTTAIFTTLNEPKPETQRRGWAKSRQRRQVWKRRAEDGQ
GDSGISSHFQPWPKHSLKHRVKKSPPEESNQNGGEGSYREAETFNSQVGLPILYFSGRRERLLLRPEVLA
EIPREAFTVEAWVKPEGGQNNPAIIAGVFDNCSHTVSDKGWALGIRSGKDKGKRDARFFFSLCTDRVKKA
TILISHSRYQPGTWTHVAATYDGRHMALYVDGTQVASSLDQSGPLNSPFMASCRSLLLGGDSSEDGHYFR
GHLGTLVFWSTALPQSHFQHSSQHSSGEEEATDLVLTASFEPVNTEWVPFRDEKYPRLEVLQGFEPEPEI
LSPLQPPLCGQTVCDNVELISQYNGYWPLRGEKVIRYQVVNICDDEGLNPIVSEEQIRLQHEALNEAFSR
YNISWQLSVHQVHNSTLRHRVVLVNCEPSKIGNDHCDPECEHPLTGYDGGDCRLQGRCYSWNRRDGLCHV
ECNNMLNDFDDGDCCDPQVADVRKTCFDPDSPKRAYMSVKELKEALQLNSTHFLNIYFASSVREDLAGAA
TWPWDKDAVTHLGGIVLSPAYYGMPGHTDTMIHEVGHVLGLYHVFKGVSERESCNDPCKETVPSMETGDL
CADTAPTPKSELCREPEPTSDTCGFTRFPGAPFTNYMSYTGITTVLFCFLLRIHGGL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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