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Report for CCDS41438.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41438.1 Public Homo sapiens 1 PAPPA2 24 110 108 CCDS HistoryNCBI Gene:60676Re-query CCDS DB by CCDS ID:41438.1Re-query CCDS DB by GeneID:60676See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41438.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000367662.5 ENSP00000356634.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000367662.5Link to Ensembl Protein Viewer:ENSP00000356634.3Re-query CCDS DB by Nucleotide ID:ENST00000367662Re-query CCDS DB by Protein ID:ENSP00000356634
Original member Current member NCBI NM_020318.3 NP_064714.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020318.3Link to Protein Sequence:NP_064714.2Re-query CCDS DB by Nucleotide ID:NM_020318Re-query CCDS DB by Protein ID:NP_064714Link to BLAST:NP_064714.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_064714.2 1791 Q9BXP8-1 1791 100% 0 0

Chromosomal Locations for CCDS 41438.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 176556323 176557241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176594524 176595595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176670970 176671115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176690137 176690430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176692126 176692318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176695738 176695859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176699100 176699589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176702607 176702735 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176706359 176706450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176709983 176710176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176711835 176711981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176739626 176739761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176739980 176740196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176765666 176765837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176769607 176769784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176770967 176771180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176789809 176789977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176791347 176791482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176793560 176793669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176800061 176800132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176840173 176840271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 176842380 176842454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5376 nt):
ATGATGTGCTTAAAGATCCTAAGAATAAGCCTGGCGATTTTGGCTGGGTGGGCACTCTGTTCTGCCAACT
CT
GAGCTGGGCTGGACACGCAAGAAATCCTTGGTTGAGAGGGAACACCTGAATCAGGTGCTGTTGGAAGG
A
GAACGTTGTTGGCTGGGGGCCAAGGTTCGAAGACCCAGAGCTTCTCCACAGCATCACCTCTTTGGAGTC
TAC
CCCAGCAGGGCTGGGAACTACCTAAGGCCCTACCCCGTGGGGGAGCAAGAAATCCATCATACAGGAC
GC
AGCAAACCAGACACTGAAGGAAATGCTGTGAGCCTTGTTCCCCCAGACCTGACTGAAAATCCAGCAGG
A
CTGAGGGGTGCAGTTGAAGAGCCGGCTGCCCCATGGGTAGGGGATAGTCCTATTGGGCAATCTGAGCTG
CTG
GGAGATGATGACGCTTATCTCGGCAATCAAAGATCCAAGGAGTCTCTAGGTGAGGCCGGGATTCAGA
AA
GGCTCAGCCATGGCTGCCACTACTACCACCGCCATTTTCACAACCCTGAACGAACCCAAACCAGAGAC
C
CAAAGGAGGGGCTGGGCCAAGTCCAGGCAGCGTCGCCAAGTGTGGAAGAGGCGGGCGGAAGATGGGCAG
GGA
GACTCCGGTATCTCTTCACATTTCCAACCTTGGCCCAAGCATTCCCTTAAACACAGGGTCAAAAAGA
GT
CCACCGGAGGAAAGCAACCAAAATGGTGGAGAGGGCTCCTACCGAGAAGCAGAGACCTTTAACTCCCA
A
GTAGGACTGCCCATCTTATACTTCTCTGGGAGGCGGGAGCGGCTGCTGCTGCGTCCAGAAGTGCTGGCT
GAG
ATTCCCCGGGAGGCGTTCACAGTGGAAGCCTGGGTTAAACCGGAGGGAGGACAGAACAACCCAGCCA
TC
ATCGCAGGTGTGTTTGATAACTGCTCCCACACTGTCAGTGACAAAGGCTGGGCCCTGGGGATCCGCTC
A
GGGAAGGACAAGGGAAAGCGGGATGCTCGCTTCTTCTTCTCCCTCTGCACCGACCGCGTGAAGAAAGCC
ACC
ATCTTGATTAGCCACAGTCGCTACCAACCAGGCACATGGACCCATGTGGCAGCCACTTACGATGGAC
GG
CACATGGCCCTGTATGTGGATGGCACTCAGGTGGCTAGCAGTCTAGACCAGTCTGGTCCCCTGAACAG
C
CCCTTCATGGCATCTTGCCGCTCTTTGCTCCTGGGGGGAGACAGCTCTGAGGATGGGCACTATTTCCGT
GGA
CACCTGGGCACACTGGTTTTCTGGTCGACCGCCCTGCCACAAAGCCATTTTCAGCACAGTTCTCAGC
AT
TCAAGTGGGGAGGAGGAAGCGACTGACTTGGTCCTGACAGCGAGCTTTGAGCCTGTGAACACAGAGTG
G
GTTCCCTTTAGAGATGAGAAGTACCCACGACTTGAGGTTCTCCAGGGCTTTGAGCCAGAGCCTGAGATT
CTG
TCGCCTTTGCAGCCCCCACTCTGTGGGCAAACAGTCTGTGACAATGTGGAATTGATCTCCCAGTACA
AT
GGATACTGGCCCCTTCGGGGAGAGAAGGTGATACGCTACCAGGTGGTGAACATCTGTGATGATGAGGG
C
CTAAACCCCATTGTGAGTGAGGAGCAGATTCGTCTGCAGCACGAGGCACTGAATGAGGCCTTCAGCCGC
TAC
AACATCAGCTGGCAGCTGAGCGTCCACCAGGTCCACAATTCCACCCTGCGACACCGGGTTGTGCTTG
TG
AACTGTGAGCCCAGCAAGATTGGCAATGACCATTGTGACCCCGAGTGTGAGCACCCACTCACAGGCTA
T
GATGGGGGTGACTGCCGCCTGCAGGGCCGCTGCTACTCCTGGAACCGCAGGGATGGGCTCTGTCACGTG
GAG
TGTAACAACATGCTGAACGACTTTGACGACGGAGACTGCTGCGACCCCCAGGTGGCTGATGTGCGCA
AG
ACCTGCTTTGACCCTGACTCACCCAAGAGGGCATACATGAGTGTGAAGGAGCTGAAGGAGGCCCTGCA
G
CTGAACAGTACTCACTTCCTCAACATCTACTTTGCCAGCTCAGTGCGGGAAGACCTTGCAGGTGCTGCC
ACC
TGGCCTTGGGACAAGGACGCTGTCACTCACCTGGGTGGCATTGTCCTCAGCCCAGCATATTATGGGA
TG
CCTGGCCACACCGACACCATGATCCATGAAGTGGGACATGTTCTGGGACTCTACCATGTCTTTAAAGG
A
GTCAGTGAAAGAGAATCCTGCAATGACCCCTGCAAGGAGACAGTGCCATCCATGGAAACGGGAGACCTC
TGT
GCCGACACCGCCCCCACTCCCAAGAGTGAGCTGTGCCGGGAACCAGAGCCCACTAGTGACACCTGTG
GC
TTCACTCGCTTCCCAGGGGCTCCGTTCACCAACTACATGAGCTACACGGATGATAACTGCACTGACAA
C
TTCACTCCTAACCAAGTGGCCCGAATGCATTGCTATTTGGACCTAGTCTATCAGCAGTGGACTGAAAGC
AGA
AAGCCCACCCCCATCCCCATTCCACCTATGGTCATCGGACAGACCAACAAGTCCCTCACTATCCACT
GG
CTGCCTCCTATTAGTGGAGTTGTATATGACAGGGCCTCAGGCAGCTTGTGTGGCGCTTGCACTGAAGA
T
GGGACCTTTCGTCAGTATGTGCACACAGCTTCCTCCCGGCGGGTGTGTGACTCCTCAGGTTATTGGACC
CCA
GAGGAGGCTGTGGGGCCTCCTGATGTGGATCAGCCCTGCGAGCCAAGCTTACAGGCCTGGAGCCCTG
AG
GTCCACCTGTACCACATGAACATGACGGTCCCCTGCCCCACAGAAGGCTGTAGCTTGGAGCTGCTCTT
C
CAACACCCGGTCCAAGCCGACACCCTCACCCTGTGGGTCACTTCCTTCTTCATGGAGTCCTCGCAGGTC
CTC
TTTGACACAGAGATCTTGCTGGAAAACAAGGAGTCAGTGCACCTGGGCCCCTTAGACACTTTCTGTG
AC
ATCCCACTCACCATCAAACTGCACGTGGATGGGAAGGTGTCGGGGGTGAAAGTCTACACCTTTGATGA
G
AGGATAGAGATTGATGCAGCACTCCTGACTTCTCAGCCCCACAGTCCCTTGTGCTCTGGCTGCAGGCCT
GTG
AGGTACCAGGTTCTCCGCGATCCCCCATTTGCCAGTGGTTTGCCCGTGGTGGTGACACATTCTCACA
GG
AAGTTCACGGACGTGGAGGTCACACCTGGACAGATGTATCAGTACCAAGTTCTAGCTGAAGCTGGAGG
A
GAACTGGGAGAAGCTTCGCCTCCTCTGAACCACATTCATGGAGCTCCTTATTGTGGAGATGGGAAGGTG
TCA
GAGAGACTGGGAGAAGAGTGTGATGATGGAGACCTTGTGAGCGGAGATGGCTGCTCCAAGGTGTGTG
AG
CTGGAGGAAGGTTTCAACTGTGTAGGAGAGCCAAGCCTTTGCTACATGTATGAGGGAGATGGCATATG
T
GAACCTTTTGAGAGAAAAACCAGCATTGTAGACTGTGGCATCTACACTCCCAAAGGATACTTGGATCAA
TGG
GCTACCCGGGCTTACTCCTCTCATGAAGACAAGAAGAAGTGTCCTGTTTCCTTGGTAACTGGAGAAC
CT
CATTCCCTAATTTGCACATCATACCATCCAGATTTACCCAACCACCGTCCCCTAACTGGCTGGTTTCC
C
TGTGTTGCCAGTGAAAATGAAACTCAGGATGACAGGAGTGAACAGCCAGAAGGTAGCCTGAAGAAAGAG
GAT
GAGGTTTGGCTCAAAGTGTGTTTCAATAGACCAGGAGAGGCCAGAGCAATTTTTATTTTTTTGACAA
CT
GATGGCCTAGTTCCCGGAGAGCATCAGCAGCCGACAGTGACTCTCTACCTGACCGATGTCCGTGGAAG
C
AACCACTCTCTTGGAACCTATGGACTGTCATGCCAGCATAATCCACTGATTATCAATGTGACCCATCAC
CAG
AATGTCCTTTTCCACCATACCACCTCAGTGCTGCTGAATTTCTCATCCCCACGGGTCGGCATCTCAG
CT
GTGGCTCTAAGGACATCCTCCCGCATTGGTCTTTCGGCTCCCAGTAACTGCATCTCAGAGGACGAGGG
G
CAGAATCATCAGGGACAGAGCTGTATCCATCGGCCCTGTGGGAAGCAGGACAGCTGTCCGTCATTGCTG
CTT
GATCATGCTGATGTGGTGAACTGTACCTCTATAGGCCCAGGTCTCATGAAGTGTGCTATCACTTGTC
AA
AGGGGATTTGCCCTTCAGGCCAGCAGTGGGCAGTACATCAGGCCCATGCAGAAGGAAATTCTGCTCAC
A
TGTTCTTCTGGGCACTGGGACCAGAATGTGAGCTGCCTTCCCGTGGACTGCGGTGTTCCCGACCCGTCT
TTG
GTGAACTATGCAAACTTCTCCTGCTCAGAGGGAACCAAATTTCTGAAACGCTGCTCAATCTCTTGTG
TC
CCACCAGCCAAGCTGCAAGGACTGAGCCCATGGCTGACATGTCTTGAAGATGGTCTCTGGTCTCTCCC
T
GAAGTCTACTGCAAGTTGGAGTGTGATGCTCCCCCTATTATTCTGAATGCCAACTTGCTCCTGCCTCAC
TGC
CTCCAGGACAACCACGACGTGGGCACCATCTGCAAATATGAATGCAAACCAGGGTACTATGTGGCAG
AA
AGTGCAGAGGGTAAAGTCAGGAACAAGCTCCTGAAGATACAATGCCTGGAAGGTGGAATCTGGGAGCA
A
GGCAGCTGCATTCCTGTGGTGTGTGAGCCACCCCCTCCTGTGTTTGAAGGCATGTATGAATGTACCAAT
GGC
TTCAGCCTGGACAGCCAGTGTGTGCTCAACTGTAACCAGGAACGTGAAAAGCTTCCCATCCTCTGCA
CT
AAAGAGGGCCTGTGGACCCAGGAGTTTAAGTTGTGTGAGAATCTGCAAGGAGAATGCCCACCACCCCC
C
TCAGAGCTGAATTCTGTGGAGTACAAATGTGAACAAGGATATGGGATTGGTGCAGTGTGTTCCCCATTG
TGT
GTAATCCCCCCCAGTGACCCCGTGATGCTACCTGAGAATATCACTGCTGACACTCTGGAGCACTGGA
TG
GAACCTGTCAAAGTCCAGAGCATTGTGTGCACTGGCCGGCGTCAATGGCACCCAGACCCCGTCTTAGT
C
CACTGCATCCAGTCATGTGAGCCCTTCCAAGCAGATGGTTGGTGTGACACTATCAACAACCGAGCCTAC
TGC
CACTATGACGGGGGAGACTGCTGCTCTTCCACACTCTCCTCCAAGAAGGTCATTCCATTTGCTGCTG
AC
TGTGACCTGGATGAGTGCACCTGCCGGGACCCCAAGGCAGAAGAAAATCAGTAA


Translation (1791 aa):
MMCLKILRISLAILAGWALCSANSELGWTRKKSLVEREHLNQVLLEGERCWLGAKVRRPRASPQHHLFGV
Y
PSRAGNYLRPYPVGEQEIHHTGRSKPDTEGNAVSLVPPDLTENPAGLRGAVEEPAAPWVGDSPIGQSEL
L
GDDDAYLGNQRSKESLGEAGIQKGSAMAATTTTAIFTTLNEPKPETQRRGWAKSRQRRQVWKRRAEDGQ
G
DSGISSHFQPWPKHSLKHRVKKSPPEESNQNGGEGSYREAETFNSQVGLPILYFSGRRERLLLRPEVLA
E
IPREAFTVEAWVKPEGGQNNPAIIA
GVFDNCSHTVSDKGWALGIRSGKDKGKRDARFFFSLCTDRVKKA
T
ILISHSRYQPGTWTHVAATYDGRHMALYVDGTQVASSLDQSGPLNSPFMASCRSLLLGGDSSEDGHYFR
G
HLGTLVFWSTALPQSHFQHSSQHSSGEEEATDLVLTASFEPVNTEWVPFRDEKYPRLEVLQGFEPEPEI
L
SPLQPPLCGQTVCDNVELISQYNGYWPLRGEKVIRYQVVNICDDEGLNPIVSEEQIRLQHEALNEAFSR
Y
NISWQLSVHQVHNSTLRHRVVLVNCEPSKIGNDHCDPECEHPLTGYDGGDCRLQGRCYSWNRRDGLCHV
E
CNNMLNDFDDGDCCDPQVADVRKTCFDPDSPK
RAYMSVKELKEALQLNSTHFLNIYFASSVREDLAGAA
T
WPWDKDAVTHL
GGIVLSPAYYGMPGHTDTMIHEVGHVLGLYHVFKGVSERESCNDPCKETVPSMETGDL
C
ADTAPTPKSELCREPEPTSDTCGFTRFPGAPFTNYMSYT
DDNCTDNFTPNQVARMHCYLDLVYQQWTES
R
KPTPIPIPPMVIGQTNKSLTIHWLPPISGVVYD
RASGSLCGACTEDGTFRQYVHTASSRRVCDSSGYWT
P
EEAV
GPPDVDQPCEPSLQAWSPEVHLYHMNMTVPCPTEGCSLELLFQHPVQADTLTLWVTSFFMESSQV
L
FDTEILLENKESVHLGPLDTFCDIPLTIKLHVDGKVSGVKVYTFDERIEIDAALLTSQPHSPLCSGCRP
V
RYQVLRDPPFASGLPVVVTHSHRKFTD
VEVTPGQMYQYQVLAEAGGELGEASPPLNHIHGAPYCGDGKV
S
ERLGEECDDGDLVSGDGCSKVCELEEGFNCVGEPSLCYMYEGDGICEPFERKTSIVDCGIYTPKGYLDQ
W
ATRAYSSHEDKKKCPVSLVTGEPHSL
ICTSYHPDLPNHRPLTGWFPCVASENETQDDRSEQPEGSLKKE
D
EVWLK
VCFNRPGEARAIFIFLTTDGLVPGEHQQPTVTLYLTDVRGSNHSLGTYGLSCQHNPLIINVTHH
Q
NVLFHHTTSVLLNFSSPRVGISAVALRTSSRIGLSAPSNCISEDEGQNHQGQ
SCIHRPCGKQDSCPSLL
L
DHADVVNCTSIGPGLMKCAITCQRGFALQASSGQYIRPMQ
KEILLTCSSGHWDQNVSCLPVDCGVPDPS
L
VNYANFSCSEGTKFLKRCSISCVPPAKLQ
GLSPWLTCLEDGLWSLPEVYCKLECDAPPIILNANLLLPH
C
LQDNHDVGTICKYECKPGYYVAESAEGKVR
NKLLKIQCLEGGIWEQGSCIPVVCEPPPPVFEGMYECTN
G
FSLDSQCVLNCNQEREK
LPILCTKEGLWTQEFKLCENLQGECPPPPSELNSVEYKCEQGYGIGAVCSPL
C
VIPPSDPVMLPENITADTLEHWMEPVKVQ
SIVCTGRRQWHPDPVLVHCIQSCEPFQADGWCDTINNRAY
C
HYDGGDCCSSTLSSKK
VIPFAADCDLDECTCRDPKAEENQ



Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser