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Report for CCDS41099.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41099.1 Public Mus musculus X P2ry10b 23 108 98 CCDS HistoryNCBI Gene:213438Re-query CCDS DB by CCDS ID:41099.1Re-query CCDS DB by GeneID:213438See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41099.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000067249.2 ENSMUSP00000065588.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000067249.2Link to Ensembl Protein Viewer:ENSMUSP00000065588.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000067249Re-query CCDS DB by Protein ID:ENSMUSP00000065588
Original member Current member EBI ENSMUST00000167673.1 ENSMUSP00000133122.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000167673.1Link to Ensembl Protein Viewer:ENSMUSP00000133122.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000167673Re-query CCDS DB by Protein ID:ENSMUSP00000133122
Original member Current member EBI ENSMUST00000180182.1 ENSMUSP00000136348.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000180182.1Link to Ensembl Protein Viewer:ENSMUSP00000136348.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000180182Re-query CCDS DB by Protein ID:ENSMUSP00000136348
Original member Current member NCBI NM_001122595.1 NP_001116067.1 Accepted alive Link to Nucleotide Sequence:NM_001122595.1Link to Protein Sequence:NP_001116067.1Re-query CCDS DB by Nucleotide ID:NM_001122595Re-query CCDS DB by Protein ID:NP_001116067Link to BLAST:NP_001116067.1
Original member Current member NCBI NM_001122596.1 NP_001116068.1 Accepted alive Link to Nucleotide Sequence:NM_001122596.1Link to Protein Sequence:NP_001116068.1Re-query CCDS DB by Nucleotide ID:NM_001122596Re-query CCDS DB by Protein ID:NP_001116068Link to BLAST:NP_001116068.1
Original member Current member NCBI NM_175442.4 NP_780651.1 Accepted alive Link to Nucleotide Sequence:NM_175442.4Link to Protein Sequence:NP_780651.1Re-query CCDS DB by Nucleotide ID:NM_175442Re-query CCDS DB by Protein ID:NP_780651Link to BLAST:NP_780651.1

Chromosomal Locations for CCDS 41099.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 107171036 107172094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1059 nt):
ATGGGTAGCAACAGTACCAGCAGTGCTGAGAGTAATTGCAATGGCACTTATTTGACATTTCAATACTCTC
TG
TATGCAACCACCTATATCTTCATATTCATCCCGGGTCTCCTGGCTAACAGTGTAGCCCTGTGGGTTCT
G
TGCCGCTTCATCAGCAAGAAGAACAAGGCCATCATCTTCATGATCAACCTCTCAGTGGCAGACCTTGCT
CAT
GTCCTGTCCTTACCTCTTCGGATTTACTATTATATCAATCGTCACTGGCCATTCCAGAGGGCCCTTT
GC
CTGCTGTGTTTCTATCTGAAATATCTCAACATGTATGCCAGCATTTTTTTCTTGACATGCATTAGCCT
T
CAGAGGTGCCTCTTTCTCCTCAAGCCATTCAGAGCCAGAAACTGGAAGCGTAGGTATGATGTGGCTATC
AGT
GCTGCTGTCTGGATCATTGTGGGGACTGCCTGTTTGCCACTTCCCATCCTGAGAAGTGCTGGCTTAG
CC
AATAACAGTGAATCGTGCTTTGCTGATTTAGGACTTCAGGACATTACTATGGCTTCATCCATTGGCAT
G
GTAACTGCAGCTGAACTTGGAGGGTTTGTATTGCCTGTTGTAATTATTACATATTGCACATGGAAAACA
AGA
AAATCTTTACAGGAATTCCAAGATCCACCTCAAAATATTAAAGAGAGGAAAAAGGCTTTGAGAATGG
TT
CTAATGTGTGCAGTGGTATTCATAGTCTGTTTCACTCCTTACCATCTCAACTTCCCATTCTTTATGAT
G
GTAAAGCAACGTGTCTTTTCAAACTGTTCCTTTATTAGGAACACTCTATGTTTCCACATCATTTCCTTG
TGT
CTTGCAAATCTGAATTGTTGTCTTGATCCAGTTGTGTATTATTTTATGACTTCAGAATTTCGTGATC
AA
TTTTCAGAACATGGGAATTTGGTCATCCAGTCATGTTTGCATTGTAAGGACAGTACTTTGGAAATTCG
T
CAGAGGAAGGAGAATCTTCAGACTATCTCTCTGGAATGTTTGGATGTTCCAACACAATGTGATGAAATG
GTT
ATCTAA


Translation (352 aa):
MGSNSTSSAESNCNGTYLTFQYSLYATTYIFIFIPGLLANSVALWVLCRFISKKNKAIIFMINLSVADLA
H
VLSLPLRIYYYINRHWPFQRALCLLCFYLKYLNMYASIFFLTCISLQRCLFLLKPFRARNWKRRYDVAI
S
AAVWIIVGTACLPLPILRSAGLANNSESCFADLGLQDITMASSIGMVTAAELGGFVLPVVIITYCTWKT
R
KSLQEFQDPPQNIKERKKALRMVLMCAVVFIVCFTPYHLNFPFFMMVKQRVFSNCSFIRNTLCFHIISL
C
LANLNCCLDPVVYYFMTSEFRDQFSEHGNLVIQSCLHCKDSTLEIRQRKENLQTISLECLDVPTQCDEM
V
I




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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