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Report for CCDS40663.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40663.1 Public Mus musculus 9 Anp32a 23 108 98 CCDS HistoryNCBI Gene:11737Re-query CCDS DB by CCDS ID:40663.1Re-query CCDS DB by GeneID:11737See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 40663.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000085519.12 ENSMUSP00000082652.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000085519.12Link to Ensembl Protein Viewer:ENSMUSP00000082652.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000085519Re-query CCDS DB by Protein ID:ENSMUSP00000082652
Original member NCBI NM_009672.3 NP_033802.2 Updated not alive Link to Nucleotide Sequence:NM_009672.3Link to Protein Sequence:NP_033802.2Re-query CCDS DB by Nucleotide ID:NM_009672Re-query CCDS DB by Protein ID:NP_033802
Current member NCBI NM_009672.4 NP_033802.2 Accepted alive Link to Nucleotide Sequence:NM_009672.4Link to Protein Sequence:NP_033802.2Re-query CCDS DB by Nucleotide ID:NM_009672Re-query CCDS DB by Protein ID:NP_033802Link to BLAST:NP_033802.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033802.2 247 O35381 247 100% 0 0

Chromosomal Locations for CCDS 40663.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 62341501 62341554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 62371720 62371869 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 62372062 62372184 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 62373485 62373677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 62374654 62374751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 62377300 62377363 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 62377554 62377615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (744 nt):
ATGGAGATGGACAAACGGATTTATTTAGAGCTGCGGAACAGGACGCCCTCTGATGTGAAAGAGCTGGTCC
TG
GATAACTGTAAGTCAATTGAAGGCAAAATCGAAGGCCTCACGGATGAGTTTGAAGAACTGGAATTCCT
A
AGTACAATCAACGTAGGCCTCACCTCCATTTCCAACTTACCAAAGTTAAACAAACTCAAGAAGCTTGAA
TTA
AGCGAAAACAGAATCTCAGGGGACCTGGAAGTATTGGCAGAGAAATGTCCGAACCTTAAGCATCTAA
AT
TTAAGTGGCAACAAAATAAAAGATCTCAGCACAATAGAGCCGCTGAAGAAGTTAGAGAATCTCAAGAG
C
CTAGACCTGTTTAACTGTGAGGTGACCAACCTGAATGCCTACCGAGAAAACGTGTTCAAGCTCCTGCCC
CAG
GTCATGTACCTCGATGGCTATGACAGGGACAACAAGGAGGCCCCCGACTCCGATGTTGAGGGCTACG
TG
GAGGATGACGACGAGGAAGATGAGGATGAGGAGGAGTATGATGAATATGCCCAGCTAGTGGAAGATGA
A
GAGGAAGAGGATGAGGAGGAAGAAGGGGAGGAAGAGGATGTGAGTGGAGAGGAGGAGGAGGATGAGGAA
GGT
TACAATGACGGGGAAGTGGATGACGAGGAAGACGAAGAAGAAGCTGGTGAAGAAGAAGGGAGTCAGA
AG
CGAAAACGAGAACCGGACGATGAGGGCGAAGAGGATGACTAA


Translation (247 aa):
MEMDKRIYLELRNRTPSDVKELVLDNCKSIEGKIEGLTDEFEELEFLSTINVGLTSISNLPKLNKLKKLE
L
SENRISGDLEVLAEKCPNLKHLNLSGNKIKDLSTIEPL
KKLENLKSLDLFNCEVTNLNAYRENVFKLLP
Q
VMYLDGYDRDNKEAPDSDVEGYVEDDDEEDED
EEEYDEYAQLVEDEEEEDEEEEGEEEDVSGEEEEDEE
G
YNDGEVDDEEDEEEAG
EEEGSQKRKREPDDEGEEDD



Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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