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Report for CCDS40099.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40099.1 Public Mus musculus 7 Plekha7 23 108 98 CCDS HistoryNCBI Gene:233765Re-query CCDS DB by CCDS ID:40099.1Re-query CCDS DB by GeneID:233765See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 40099.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000084664.10 ENSMUSP00000081714.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000084664.10Link to Ensembl Protein Viewer:ENSMUSP00000081714.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000084664Re-query CCDS DB by Protein ID:ENSMUSP00000081714
Original member NCBI NM_172743.3 NP_766331.1 Updated not alive Link to Nucleotide Sequence:NM_172743.3Link to Protein Sequence:NP_766331.1Re-query CCDS DB by Nucleotide ID:NM_172743Re-query CCDS DB by Protein ID:NP_766331
Current member NCBI NM_172743.4 NP_766331.1 Accepted alive Link to Nucleotide Sequence:NM_172743.4Link to Protein Sequence:NP_766331.1Re-query CCDS DB by Nucleotide ID:NM_172743Re-query CCDS DB by Protein ID:NP_766331Link to BLAST:NP_766331.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_766331.1 1030 Q3UIL6-4 1030 100% 0 0

Chromosomal Locations for CCDS 40099.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 116124798 116124820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 116128554 116128693 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 116129392 116129525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 116132621 116132776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 116135039 116135239 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 116135918 116136021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 116136987 116137104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 116137190 116137378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 116140277 116140503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 116140616 116140724 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 116142698 116142799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 116143290 116143439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 116144916 116144996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 116145170 116145238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 116154633 116154686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 116157482 116157568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 116157857 116158379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 116164032 116164496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 116170662 116170822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3093 nt):
ATGAGGGCACTCATCTACAGCACCACCACAGCGGGCTCTCAGATGGAGCACTCGGGCATGAGGACCTACT
ACTTCAGTGCCGACACCCTGGAGGACATGAACGCCTGGGTCAGGGCCATGAACCAGGCTGCGCAGGTGCT
GTCTCGCTCATCGCTGAGGAGGGACGTGGACAAGGTGGAGCGGCAGGCCATGCCACAGGCCAACCACACT
GACGCCTGCCAAGAATGTGGCCACGTGGGACCTGGGCACTCGAGAGACTGTCCTCGTCGAGGCTATGAGG
ACTCCTATGGCTTCAACAGGAGGGAGCAGGAGGAGGAACGCTTCCGTGCTCAAAGAGACCCACTGGAGGG
CAGGAGGGACAGGAGCAAGGCCAGGTCCCCATACTTGCCAGCTGAGGAGGATGCCTTGTTTGTCGATCTA
CCTGGTGGGCCCCGAGGCCAGCAAGCACAGCCACAGCGAGCCGAGAAGAACGGGGTGCCACCTTATGGCC
TGGGAGAACAGAATGGGACCAATGGGTACCAGCGGACTGCTCCTCCCAGGGCCAACCCAGAAAAACACAG
CCAGAGGAAGACCGGCCTGGCCCAGGCAGAGCACTGGACAAAAGCTCAGAAGGGGGACGGCAGGAGCTTG
CCCTTAGACCAAACACTTCCTCGCCAGGGTCCCAGCCAGCCCCTGTCCTTCCCGGAAAACTACCAGAGTC
TTCCCAAGAGCACTAGACATCTTTCTGGGAGCTCGTCACCCCCTCCCCGGAACCTGCCCAGCGACTACAA
GTACGCACAGGACCGAGCCAGCCACCTGAAGATGTCCAGTGAAGAGCGCCGGGCACACAGAGACGGCACT
GTGTGGCAGCTCTATGAGTGGCAGCAGAGGCAGCAGTTCCGTCACGGCAGCCCCACCGCACCCATAGGAG
CTGGCTCCCCAGAGTTCACCGAGCAGGGTCGCAGCCGGAGCCTGCTGGAGGTGCCCCGCTCCATCTCCGT
GCCTCCGTCTCCTTCTGACATCCCTCCTCCTGGGCCTCCAAGGCCCTTTCCGCCCCGGCGGCCACATACA
CCAGCAGAAAGGGTCACAGTGAAGCCACCCGAGCAGAGGAGGAGTGTGGACATCTCTCTGGGGGGTTCTC
CCAGGAAGGCACGGGGTCATGCTGCCAAGAACTCCTCTCACGTGGACCGGCGTTCCATGCCCTCCATGGG
CTACATGACCCATACAGTGAGCGCTCCCAGCTTACATGGAAAATCGGCTGATGACACCTACCTCCAGCTG
AAGAAGGACCTGGAGTATCTGGATCTGAAGATGACAGGCCGAGACCTTCTTAAAGATCGAAGTCTGAAGC
CCATGAAGATCGCCGAGAGTGACATTGATGTCAAGCTGAGCATCTTCTGTGAGCAAGACAGGATACTCCA
GGACTTGGAAGACAAGATCCGAGCTCTCAAGGAGAATAAAGATCAGCTAGAATCCGTGCTGGAGGTGCTG
CACAGGCAGACAGAACAGTACCGAGACCAGCCACAGCACCTGGAGAAGATCACTTGCCAGCAGAGGCTCC
TGCAGGAGGACCTCGTCCACATCCGTGCGGAGCTCTGCAGAGAGTCCACGGAGATGGAAAATGCATGGAA
CGAGTACCTGAAGCTGGAGAAGGATGTGGAGCAGCTAAAGCAGACCCTGCAGGAGCAACACAGGAGAGCC
TTTTTTTTCCAGGAGAAGTCTCAGATACAGAAGGATCTGTGGAGGATCGAAGATGTCATGGCAGGCCTGA
GTGCGAATAAAGAGAACTACAGAGTCCTGGTGGGATCTGTCAAAAATCCAGAAAGAAAAACGGTGCCTTT
GTTCCCTCACCCATCTGTGCCTTCACTCTCTCCAACTGAGAGCAAGCCGGCCCTGCAGCCCAGCCCTCCC
ACCAGCCCCGTGCGGACGCCTCTGGAGGTCCGACTCTTTCCGCAGCTGCAGACCTATGTGCCATACCGAC
CTCACCCGCCCCAGCTGAGGAAAGTGATGTCTCCTCTGCAGTCACCAACCAAGGCAAAGCCTCAGGCGGA
AGACGAGGCACCTCCCAGGCCACCACTTCCTGAACTCTACAGCCCAGAGGACCAGCCCCCAGCTGTGCCA
CCACTGCCGAGAGAAGCCACCATCATTCGGCACACATCTGTGCGTGGACTCAAACGACAGTCGGATGAGA
GGAAGAGGGACCGGGAGCAGGGCCAGTGTGTGAATGGGGACTTGAAGGTGGAGCTCCGGTCCTACGTGAG
TGAGCCAGAGCTGGCCAGCCTCAGTGGGGACGTGCCTCAGCCCTCCTTGAGCCTCGTGGGCTCTGAGAGC
AGGTACCAGACGCTGCCAGGCAGAGGGCTCTCAGGCTCCACGTCCAGGCTCCAGCAGTCGTCCACCATTG
CTCCCTATGTCACACTCCGGAGGGGGCTGAATGCCGAAAACAGCAGTGCGACCTTCTCTAGACCCAAGAG
TGCCTTGGAGCGTCTGTACTCGGGGGACCACCAGCGGGGCAAGATGAGTGCGGAGGAACAGCTGGAGCGG
ATGAAGCGGCACCAGAAGGCTCTGGTCCGAGAGCGCAAGAGGACCCTGAGCCAAGGAGAAAAGACGGGTC
TGCTCTCAGCCCGATACCTCAGCCAGCCACTGCCAGGAGATCTCGGCTCATGGAAGCGAGAACAAGAGTT
TGACCTGCAGCTGCTGGAACGGGCTGCTCAGGGGGACAGAAAAGACAAAGAGGAGGGCTGGCTGAAAGTG
CAAGCCACACCTGTCATGGAGTTGGACCTGGAGCCACAAGACTATGACTTGGACATCAGCAGAGAGCTGT
CTAAACCAGAGAAGGTCTCCATCCCCGAGCGATATGTGGAACTAGACCCCGAGGAACCACCCAGCCTGGA
GGAGCTGCAGGCACGGTACCAAAAGGCGGAGAAGATACGGAATATCCTTGCCCGGTCAAGCATGTGCAAC
CTGCAGCCACTGGGCCAGGACCGCAACAGCCTGGCCGACCTGGACTCGCAGCTGCAGGAGCAGGAACGGA
TAATCAACATTTCCTATGCCCTGGCCTCTGAGGCCTCGAAGCGCAGCAAACAGGTAGCAGCCCAGGCAAT
AACAGACCCATGA

Translation (1030 aa):
MRALIYSTTTAGSQMEHSGMRTYYFSADTLEDMNAWVRAMNQAAQVLSRSSLRRDVDKVERQAMPQANHT
DACQECGHVGPGHSRDCPRRGYEDSYGFNRREQEEERFRAQRDPLEGRRDRSKARSPYLPAEEDALFVDL
PGGPRGQQAQPQRAEKNGVPPYGLGEQNGTNGYQRTAPPRANPEKHSQRKTGLAQAEHWTKAQKGDGRSL
PLDQTLPRQGPSQPLSFPENYQSLPKSTRHLSGSSSPPPRNLPSDYKYAQDRASHLKMSSEERRAHRDGT
VWQLYEWQQRQQFRHGSPTAPIGAGSPEFTEQGRSRSLLEVPRSISVPPSPSDIPPPGPPRPFPPRRPHT
PAERVTVKPPEQRRSVDISLGGSPRKARGHAAKNSSHVDRRSMPSMGYMTHTVSAPSLHGKSADDTYLQL
KKDLEYLDLKMTGRDLLKDRSLKPMKIAESDIDVKLSIFCEQDRILQDLEDKIRALKENKDQLESVLEVL
HRQTEQYRDQPQHLEKITCQQRLLQEDLVHIRAELCRESTEMENAWNEYLKLEKDVEQLKQTLQEQHRRA
FFFQEKSQIQKDLWRIEDVMAGLSANKENYRVLVGSVKNPERKTVPLFPHPSVPSLSPTESKPALQPSPP
TSPVRTPLEVRLFPQLQTYVPYRPHPPQLRKVMSPLQSPTKAKPQAEDEAPPRPPLPELYSPEDQPPAVP
PLPREATIIRHTSVRGLKRQSDERKRDREQGQCVNGDLKVELRSYVSEPELASLSGDVPQPSLSLVGSES
RYQTLPGRGLSGSTSRLQQSSTIAPYVTLRRGLNAENSSATFSRPKSALERLYSGDHQRGKMSAEEQLER
MKRHQKALVRERKRTLSQGEKTGLLSARYLSQPLPGDLGSWKREQEFDLQLLERAAQGDRKDKEEGWLKV
QATPVMELDLEPQDYDLDISRELSKPEKVSIPERYVELDPEEPPSLEELQARYQKAEKIRNILARSSMCN
LQPLGQDRNSLADLDSQLQEQERIINISYALASEASKRSKQVAAQAITDP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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