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Report for CCDS38418.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
38418.1 Public Mus musculus 3 Nudt6 23 108 98 CCDS HistoryNCBI Gene:229228Re-query CCDS DB by CCDS ID:38418.1Re-query CCDS DB by GeneID:229228See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 38418.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000099130.8 ENSMUSP00000096733.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000099130.8Link to Ensembl Protein Viewer:ENSMUSP00000096733.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000099130Re-query CCDS DB by Protein ID:ENSMUSP00000096733
Original member Current member NCBI NM_153561.3 NP_705789.1 Accepted alive Link to Nucleotide Sequence:NM_153561.3Link to Protein Sequence:NP_705789.1Re-query CCDS DB by Nucleotide ID:NM_153561Re-query CCDS DB by Protein ID:NP_705789Link to BLAST:NP_705789.1

Chromosomal Locations for CCDS 38418.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 3 (NC_000069.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 37405097 37405491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 37409508 37409562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 37412360 37412415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 37416701 37416904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 37419342 37419570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (939 nt):
ATGTGGTGGGTGAGGAGGACCCGCTACTGGTTCTCCACATTGCTTTACGCGGGCGGAGCCAGGCTCCGGC
CGGGGCGGCGCACAGCCTCGGGCGGCCTGGAGACCCCGGGCTCCTGCGGGGCCGAGCTACAAGGCGAGCT
GGACAGATTTGGGGGCGTCTCGGTGCACTTGTCGCGGCACCATACGTTGCACGGGCTGGATGCCGCCGCC
TTCCGGAGGCTCTTGCAGGCTGCCATTCAGCAGTGGCGCTCAGAAGGACGGATAGCTGCCTGGCTACACA
TCCCCATCCTGCAGAGCCACTTCATTGCCCCTGCTGCTTCCCTGGGCTTTTGCTTCCACCACGCAAAACC
CCATTCCTCAACACTGACTCTGTGGCTGGGAGAAGGACCCAGCAGACTCCCGGGATATGCTACACACCAA
GTTGGAGTTGCAGGTGCTGTATTTGATGTTAGCACCAGGAAAGTACTGGTTGTACAAGATCGAAATAAAT
TGAAAAACATGTGGAAGTTTCCAGGAGGCCTGTCGGAGCCAGGAGAAGATATTGACACAGCAGTCCGAGA
GGTTTTTGAAGAGACTGGTGTCAAGTCAGAATTCAGGTCCCTGTTGAGCATCCGGCAGCAACACAGGAGC
CCTGGGGCCTTCGGGATGTCAGACATGTACCTGGTCTGCCGCCTGCAGCCTCGTTCCTTCACTATCAACT
TCTGCCAGCAGGAATGCTTGAAGTGTGAATGGATTGATCTAGAAAACCTGGCCCGGACTAAACACACGAC
CCCCATCACCAGCAGGGTGGCTAGGCTACTGCTGTATGGACTCAGGGAAGGGTTTGACAAAATTGACCTC
AGCATGGAGGAGCTCCCTGCAGTGTACACAGGCCTGTTCTACAAACTCTATCACAGGGAGCTGCCGGAGA
GTTACAAAGCCGCAACGGGAGCAGACTGA

Translation (312 aa):
MWWVRRTRYWFSTLLYAGGARLRPGRRTASGGLETPGSCGAELQGELDRFGGVSVHLSRHHTLHGLDAAA
FRRLLQAAIQQWRSEGRIAAWLHIPILQSHFIAPAASLGFCFHHAKPHSSTLTLWLGEGPSRLPGYATHQ
VGVAGAVFDVSTRKVLVVQDRNKLKNMWKFPGGLSEPGEDIDTAVREVFEETGVKSEFRSLLSIRQQHRS
PGAFGMSDMYLVCRLQPRSFTINFCQQECLKCEWIDLENLARTKHTTPITSRVARLLLYGLREGFDKIDL
SMEELPAVYTGLFYKLYHRELPESYKAATGAD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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