CCDS Report for Consensus CDS

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Report for CCDS37744.1 (current version)

CCDS	Status	Species	Chrom.	Gene	CCDS Release	NCBI Annotation Release	Ensembl Annotation Release	Links
37744.1	Public	Mus musculus	18	Dsc3	23	108	98

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Attributes
Inferred exon combination

Sequence IDs included in CCDS 37744.1

Original	Current	Source	Nucleotide ID	Protein ID	Status in CCDS	Seq. Status	Links
		EBI	ENSMUST00000225110.1	ENSMUSP00000153261.1	Accepted	alive
		NCBI	NM_007882.3	NP_031908.3	Accepted	alive

RefSeq	Length	Related UniProtKB/SwissProt	Length	Identity	Gaps	Mismatches
NP_031908.3	896	P55850-1	896	100%	0	0

Chromosomal Locations for CCDS 37744.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 18 (NC_000084.6)

Genome Browser links:

Chromosome	Start	Stop
18	19963372	19963569
18	19965628	19965882
18	19966220	19966341
18	19968219	19968443
18	19971378	19971602
18	19973784	19973926
18	19974040	19974299
18	19980601	19980786
18	19981119	19981253
18	19983536	19983702
18	19985631	19985775
18	19986970	19987125
18	19988273	19988392
18	19989512	19989711
18	19991512	19991596
18	20001857	20001925

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.

Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2691 nt):
ATGGTGGTTCCTGAGTTCCGGAGCCCACAGTGCAGGGCACTATGCACGAAGCTGCTGCTGACCCTCTGGG TCTTCAGTTTTGTTGGTGAAGCCTGTAAAAAGGTGACATTTCATGTACCTTCAACACTAGAGGCAGACAA GATCATCGGAAGAGTTAGTTTGAAAGAGTGTCTCAGCTCGGCAGATGGCATCATGCCAAGTGATCCTGAT TTCAGAGTTCTAGATGATGGGTCAGTTTATCCGACCAGAGCTGTTGTATTGTCTGATGAGAAAAGATCTT TTACCATTCAGCTTTCTGATTCAAAGATGCAGACACAGAAAGAGATCCCTGTAATCCTGGAGCACAAGAA GAAGGTACTGAAGAAAAGACACACTAAGGAAACTGTCCTCAGAAGATCTAAGAGAAGATGGGCACCCATT CCATGTTCAATGCAAGAAAATTCCTTGGGTCCCTTCCCATTGTTTCTTCAACAGGTTCAGTCTGATGCAG CTCAGAACTACACAGTCTTCTATTCAATAAGTGGGCGTGGAGCTGATCAAGAACCACTTAACTGGTTTTT CATCGAGAGAGACACTGGGAATCTATATTGTACTCGGCCTGTGGATCGTGAGGAATATGATGTTTTTGAT TTGATTGCCTATGCATCCACTGCAGATGGCTATTCAGCAGATTTACCTCTCCCACTGCCCATCAAAATAG AGGATGAAAATGACAATTACCCTCTTTTTACAGAAGCAATTTATGCTTTTGAAGTTCCAGAAGGCAGTAG ACTTGGTACTGTAGTGGGAACAGTTTGTGCCACGGATAAAGATGAGCCTGACACTATGCACACACGCCTC AAGTACAGCATCTTGGAGCAGACCCCACCATCACCTGGGCTTTTTTCTGTGCACCCTGACACAGGTGTCA TCACCACCGTCTCTCACTACATGGACAGAGAGGTCGTGGACAAGTACAAACTGATAATGAAAGTTCAGGA CATGAATGGCCAATTTTTTGGACTAATCAGTACATCAACTTGTATCATAACTGTGCAAGATTCCAATGAC AATGCACCCACATTCAGACAAAATACTTATGAAACTGCTGTGGAGGAAAATACATATAATGTTGAAATCT TGCGCATACCTGTAGATGATAAGGACATGATTAACACTGCCAACTGGAAGGCAAATTTCACCATCTTAAA AGGAAATGAAAATGGATGGTTCAAAATCACAACAGACCCAGTGACAAATGAAGGTGTTCTGTGTGTTGTG AAGCCACTGGATTATGAAGAAAATCGTCAAGTGACCCTAGAGATTGGTGTGAACAACGAAGCTCCATTCA TTAAAGATGTTGCAAACCGAATTCCCACCATGAACCGGGCTATGGTTACAGTACATGTGAAGGATCAGAA TGAGGGGCCAGAATGCAAGCCCCCAGAGCAATATGTGCGGATCAAAGAGAACTCAGCAGTTGGGTCTAAG ATCAATGGCTACAAGGCCTACGACCCTGAAACCAAGAATAGCAATGGCTTAAGGTACAAAAAATTGCAGG ATCCTAAAGACTGGGTCAGCATTGAAGAAGTTTCGGGGTTGCTTACCATATCAAAAACCCTAGACAGAGA AATAATGGCTCCAAGAAATGACATGTACAATATTACAGTCATGGCAATTGACCAAGAGGGTAAATCATGC ACAGGAACACTTGCAGTGAACATCGAGGATGTGAATGACAACGCACCAGAGATAATTCAAGATTATATTG TTATCTGTAAGCCAAAGATGGGGTACACGGACATTTCAGCTGTGGATCCTGATGAACCTATCCATGGCCC TCCCTTTCAGTTCAACTTGGCAAACACTTCTCCAGAAGTCAACAGAATCTGGACCCTCAACCAAGTTAAT GATACAGCTGCTCGCCTGTCCTATCAGAAAACTGCGGATGTTCAAATATACAACGTTCCTGTTACTGTAA AAGACAGAGCAGGCCAATCTGCAACCAAAATCTTGAGAGTTAACCTGTGTGATTGTACTCATCCCAGCCA ATGTCCGCTCAGATCAAGGAGTGCAGGAATTACCCTGGGAAAGTGGGCCATCCTTGCCATCTTGCTGGGC ATTGCTCTGCTATTTTCGGTACTGCTAACTTTGGTATGTGGAGTTGTTACTGCCCGAAAAGGAAAACACT TCCCTGAAGATTTAGCGCAGCAAAACTTAATTATATCAAATACCGAAGCACCTGGGGATGACAGAGTGTG CTCTGCCAATGGATTCACCACCCACACTGCCAACAACTCCAGCCAAGGCTTCTGTGGTACAATGGGGTCA GGAATGAGGAATGGTGGGCAGGAGACCATCGAGATGATGAAAGGACACCAGACCTTGGACTCCTGCCGTG TGGCCGGGCATCACCATACCCTGGACTCCGGCAGGGGAGGACACATGGATACTGACAACTGCAGATACAC ATACTCAGAGTGGCACAGTTTCACTCAACCCCGACTTGGTGAAAAATTGCATGTGTGTAATCAGAATGAA GACCACATCCCATCCCAAGACTATGTCCTCACCTATAACTATGAAGGCAGAGGGTCTCCGGCCGGCTCTG TAGGTTGCTGCAGTGAAAAGCAGGAAGAAGAGGGACTTGACTTTTTAAACAACTTGGAACCCAAATTTCT TACATTGGCAGAAACATGCACAAAGAGATAA
Translation (896 aa):
MVVPEFRSPQCRALCTKLLLTLWVFSFVGEACKKVTFHVPSTLEADKIIGRVSLKECLSSADGIMPSDPD FRVLDDGSVYPTRAVVLSDEKRSFTIQLSDSKMQTQKEIPVILEHKKKVLKKRHTKETVLRRSKRRWAPI PCSMQENSLGPFPLFLQQVQSDAAQNYTVFYSISGRGADQEPLNWFFIERDTGNLYCTRPVDREEYDVFD LIAYASTADGYSADLPLPLPIKIEDENDNYPLFTEAIYAFEVPEGSRLGTVVGTVCATDKDEPDTMHTRL KYSILEQTPPSPGLFSVHPDTGVITTVSHYMDREVVDKYKLIMKVQDMNGQFFGLISTSTCIITVQDSND NAPTFRQNTYETAVEENTYNVEILRIPVDDKDMINTANWKANFTILKGNENGWFKITTDPVTNEGVLCVV KPLDYEENRQVTLEIGVNNEAPFIKDVANRIPTMNRAMVTVHVKDQNEGPECKPPEQYVRIKENSAVGSK INGYKAYDPETKNSNGLRYKKLQDPKDWVSIEEVSGLLTISKTLDREIMAPRNDMYNITVMAIDQEGKSC TGTLAVNIEDVNDNAPEIIQDYIVICKPKMGYTDISAVDPDEPIHGPPFQFNLANTSPEVNRIWTLNQVN DTAARLSYQKTADVQIYNVPVTVKDRAGQSATKILRVNLCDCTHPSQCPLRSRSAGITLGKWAILAILLG IALLFSVLLTLVCGVVTARKGKHFPEDLAQQNLIISNTEAPGDDRVCSANGFTTHTANNSSQGFCGTMGS GMRNGGQETIEMMKGHQTLDSCRVAGHHHTLDSGRGGHMDTDNCRYTYSEWHSFTQPRLGEKLHVCNQNE DHIPSQDYVLTYNYEGRGSPAGSVGCCSEKQEEEGLDFLNNLEPKFLTLAETCTKR

	Links Key
	Links to:	History report BLAST report Entrez Gene Nucleotide report Protein report
	Re-query CCDS DB by:	CCDS ID Gene ID Nucleotide ID Protein ID
	Genome Browser Links:	Ensembl Genome Browser NCBI Sequence Viewer UCSC Genome Browser VEGA Genome Browser

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