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Report for CCDS37380.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37380.1 Public Mus musculus 16 Tmprss15 23 108 98 CCDS HistoryNCBI Gene:19146Re-query CCDS DB by CCDS ID:37380.1Re-query CCDS DB by GeneID:19146See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37380.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000060402.5 ENSMUSP00000052034.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000060402.5Link to Ensembl Protein Viewer:ENSMUSP00000052034.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000060402Re-query CCDS DB by Protein ID:ENSMUSP00000052034
Original member NCBI NM_178855.4 NP_849186.2 Updated not alive Link to Nucleotide Sequence:NM_178855.4Link to Protein Sequence:NP_849186.2Re-query CCDS DB by Nucleotide ID:NM_178855Re-query CCDS DB by Protein ID:NP_849186
Current member NCBI NM_178855.5 NP_849186.2 Accepted alive Link to Nucleotide Sequence:NM_178855.5Link to Protein Sequence:NP_849186.2Re-query CCDS DB by Nucleotide ID:NM_178855Re-query CCDS DB by Protein ID:NP_849186Link to BLAST:NP_849186.2

Chromosomal Locations for CCDS 37380.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 16 (NC_000082.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 78953800 78953955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 78957310 78957452 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 78960540 78960635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 78962014 78962195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 78967938 78968124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 78968267 78968316 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 78972180 78972275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 78985875 78986007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 78987644 78987754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 79001737 79001877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 79003324 79003449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 79006130 79006219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 79021387 79021522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 79024289 79024439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 79024754 79024859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 79034205 79034354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 79035111 79035251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 79054034 79054140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 79057611 79057719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 79062137 79062268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 79071401 79071445 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 79073177 79073212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 79075776 79075820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 79078949 79079100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 79087449 79087516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 79087763 79087893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 79090773 79090917 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3165 nt):
ATGAAATCCAGCAGAGACGAGGCTGTAGGACATCACTCTATCAGCTCTTTTGAAGTGATGCTCTCAGCTC
TCTTCATTATGCTCATGGTCTTCTCTATTGGATTAATTGCAGTGTCCTGGCTTGCAGTCAAGGAATCTGA
AGGAGATGCAGCCCTGGGGAAAAGTCATGAAGTCAGAGGGACATTTAAAATAACATCTGGAGTGACATAT
AATCCTAATTTACAAGACAAACACTCTGTGGATTTCAAAGTTCTTGCTTTTGACCTTCAGCAAATGATAG
ACGAGATCTTTGAATCAAGTAGTCTGAAGAATGAATATGAAAAATCGAAGGTTTTTCAATTTGAAAAAGG
CAGCGTTATTGTCCTCTTTGACCTCTTTTTTGCTCAGTGGGTGTCAGATAAAAATGTAAAAGAAGAACTG
ATTCAGGGCATTGAAGCAAATATATCCAGCCAACTGGTCACTCTCCATATTGATTTGAACAGCATTGATA
TCACAGCATCCTTGAGTGACTTCACAACAGCAGTCCCTGTAACAACTTCAGATAAGCTAACAACCAGCAG
TCCTATGACAACTTCAGCATCACTGGGTAACTTATCAACAACAGTGGCTGCAACAACTTCAGGCCATGTC
TCAATAGAGTGCCAGCCTGGTTCACGGCCCTGTGCTCATGCTTGGAACTGTGTAGCAACTGATTTGTTTT
GTGATGGAGAAGTGAACTGTCCAGATGGTTCAGATGAAGACACTGGGCTATGTGCCACAGCTTGTGATGG
AAGATTTTTGTTGACTGGAGATTCTGGGGTTTTCCAAGCTGATCGTTATCCAAGGCCAGATGAATCAGGT
GTTGTTTGCCGATGGATCATCCGTGTAAACCAAGGACTTTCCATTAGAATGAACTTTGGATCTTTTATTC
CACATTATACAGATGTGTTAGATATCTATGAAGGTATAGGACCTAGCAAAATTTTAAGAGGCTCCTTTTG
GGAAACTGATCCTGGAACAATTCGAATTTTTTCCAACCTAGTTACTGTCACCTTTCTGATAAAATCAGAT
GAATATGATTACATTGGTTTTAATGCAACGTACAGCACTTTCAACAACAGCGAACTTAACAATTATGAGA
AAATCGACTGTACATTTGATGATGGATTTTGCTTCTGGACCCAGGATCTTGATGATGATAATGAGTGGGA
AAGAATCCAAGTGACCACGTTTCCTTGCTACACTGGCCCACGTTTTGACCACACATATGGGAATGGCTCA
GGATTTTACATTTCTACACCAACTGAACAGGGATGGAGAAGCGAAAGAGTAGGCCTTTCAAGCCTCTCTT
TAGACCTCACTTCAGAGCCTGTCTGCCTTCATTTTTGGTATTACATGTGCTGTGAAAATGTCTACAATTT
AAACATTCATATCAGCAGTGCTGAAACCACAGACAAGATAGTTTTTCAAAGGAAAGGAAACTATGGGAGG
AACTGGAATTATGGTCAAGTCACATTAAATGAAACAGGAGAATTTAAGGTTGTGTTCAATGCTTTCAGAA
ACCGAGGTTGCAGTACAATAGCCCTGGATGATATAAGCCTAACAAATGGAATTTGTAGTCAGAGTCCTTA
TCCAGAACCAACCTTGGTTCCCACCCCTCCACCAGAGCTTCCAACTGACTGCGGAGGACCTTTTGAACTA
TGGGAGCCAAATTCAACCTTCAGTTCTCCGAACTTTCCAGACAAATATCCCAATCAAGCTTCCTGTATAT
GGAATTTAAATGCACAGAGAGGGAAAAATATTCAACTTCATTTTCAAGAATTCGATTTAGAAAACATCAA
TGATGTGGTGGAAGTTAGAGATGGGGGAGAATTTGACTCCCTGCTCCTAGCTGTGTACACAGGACCTGGT
CCTGTGAAGGACTTGTTCTCTACCACCAATAGGATGACTGTGATTTTCACCACAAACATGGAGACCAGAC
GCAAGGGCTTCAAAGCAAATTTCACTTCCGGCTATTACTTGGGGATTCCAGAGCCCTGCCAAGATGACGA
ATTTCAGTGCAAAGATGGAAACTGCATTCCTCTGGGGAATCTCTGTGATAGCTACCCGCACTGTAGAGAT
GGCTCAGATGAAGCAAGCTGTGTGCGTTTTCTTAATGGCACAAGAAGCAACAATGGGTTGGTACAGTTCA
ATATCCATAGCATATGGCATATAGCTTGTGCTGAGAACTGGACCACACAAATTTCAAATGAAGTTTGTCA
TCTTCTGGGACTAGGGAGTGCAAACTCATCAATGCCAATATCATCTACCGGAGGTGGACCATTTGTGAGA
GTAAACCAAGCCCCTAATGGAAGCTTGATACTAACTCCTAGTCTACAATGCTCCCAAGATTCCTTGATTC
TATTGCAATGCAACCATAAATCATGTGGAGAAAAAAAGGTGACTCAGAAAGTCAGCCCAAAGATCGTTGG
TGGAAGTGACGCCCAGGCAGGGGCCTGGCCCTGGGTTGTGGCTTTGTATCACAGAGACAGGTCTACAGAC
CGTCTGCTCTGCGGTGCATCTCTTGTCAGCAGTGACTGGCTGGTGTCAGCTGCACACTGTGTGTATAGAA
GAAATCTAGATCCAACCAGATGGACAGCAGTCCTGGGCCTGCATATGCAATCAAATCTGACTTCTCCTCA
AGTAGTAAGACGGGTGGTTGATCAAATTGTCATAAACCCTCATTATGACAGACGCAGAAAGGTCAACGAC
ATCGCTATGATGCACCTTGAGTTTAAAGTAAATTACACAGATTATATACAGCCTATTTGTTTACCAGAAG
AGAATCAAATATTTATTCCAGGAAGAACTTGTTCGATTGCTGGCTGGGGATATGATAAAATAAATGCAGG
TTCTACTGTTGATGTGCTGAAAGAAGCTGATGTTCCTCTTATATCCAATGAAAAGTGCCAGCAACAGCTG
CCAGAATACAACATCACTGAAAGTATGATATGTGCAGGATATGAAGAAGGAGGAATAGATTCTTGTCAGG
GTGATTCTGGAGGGCCATTAATGTGCCAAGAAAACAACAGATGGTTTCTTGTTGGTGTGACATCATTTGG
AGTCCAGTGTGCACTGCCTAATCACCCTGGGGTATATGTCCGAGTCTCACAGTTTATAGAATGGATCCAT
AGCTTTCTACATTAG

Translation (1054 aa):
MKSSRDEAVGHHSISSFEVMLSALFIMLMVFSIGLIAVSWLAVKESEGDAALGKSHEVRGTFKITSGVTY
NPNLQDKHSVDFKVLAFDLQQMIDEIFESSSLKNEYEKSKVFQFEKGSVIVLFDLFFAQWVSDKNVKEEL
IQGIEANISSQLVTLHIDLNSIDITASLSDFTTAVPVTTSDKLTTSSPMTTSASLGNLSTTVAATTSGHV
SIECQPGSRPCAHAWNCVATDLFCDGEVNCPDGSDEDTGLCATACDGRFLLTGDSGVFQADRYPRPDESG
VVCRWIIRVNQGLSIRMNFGSFIPHYTDVLDIYEGIGPSKILRGSFWETDPGTIRIFSNLVTVTFLIKSD
EYDYIGFNATYSTFNNSELNNYEKIDCTFDDGFCFWTQDLDDDNEWERIQVTTFPCYTGPRFDHTYGNGS
GFYISTPTEQGWRSERVGLSSLSLDLTSEPVCLHFWYYMCCENVYNLNIHISSAETTDKIVFQRKGNYGR
NWNYGQVTLNETGEFKVVFNAFRNRGCSTIALDDISLTNGICSQSPYPEPTLVPTPPPELPTDCGGPFEL
WEPNSTFSSPNFPDKYPNQASCIWNLNAQRGKNIQLHFQEFDLENINDVVEVRDGGEFDSLLLAVYTGPG
PVKDLFSTTNRMTVIFTTNMETRRKGFKANFTSGYYLGIPEPCQDDEFQCKDGNCIPLGNLCDSYPHCRD
GSDEASCVRFLNGTRSNNGLVQFNIHSIWHIACAENWTTQISNEVCHLLGLGSANSSMPISSTGGGPFVR
VNQAPNGSLILTPSLQCSQDSLILLQCNHKSCGEKKVTQKVSPKIVGGSDAQAGAWPWVVALYHRDRSTD
RLLCGASLVSSDWLVSAAHCVYRRNLDPTRWTAVLGLHMQSNLTSPQVVRRVVDQIVINPHYDRRRKVND
IAMMHLEFKVNYTDYIQPICLPEENQIFIPGRTCSIAGWGYDKINAGSTVDVLKEADVPLISNEKCQQQL
PEYNITESMICAGYEEGGIDSCQGDSGGPLMCQENNRWFLVGVTSFGVQCALPNHPGVYVRVSQFIEWIH
SFLH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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