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Report for CCDS27567.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27567.1 Public Mus musculus 15 Cyc1 23 108 98 CCDS HistoryNCBI Gene:66445Re-query CCDS DB by CCDS ID:27567.1Re-query CCDS DB by GeneID:66445See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27567.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000023210.7 ENSMUSP00000023210.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000023210.7Link to Ensembl Protein Viewer:ENSMUSP00000023210.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000023210Re-query CCDS DB by Protein ID:ENSMUSP00000023210
Original member Current member NCBI NM_025567.3 NP_079843.1 Accepted alive Link to Nucleotide Sequence:NM_025567.3Link to Protein Sequence:NP_079843.1Re-query CCDS DB by Nucleotide ID:NM_025567Re-query CCDS DB by Protein ID:NP_079843Link to BLAST:NP_079843.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079843.1 325 Q9D0M3-1 325 100% 0 0

Chromosomal Locations for CCDS 27567.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 76343564 76343692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76344302 76344498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76344582 76344708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76344812 76344969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76345053 76345213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76345477 76345577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76345655 76345759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (978 nt):
ATGGCGGCGGCGGCGGCTTCGCTTCGCCGGACGGTACTGGGCCCGCGGGGCGTGGGGCTTCCAGGTGCAA
GTGCTCCGGGTCTGCTGGGCGGCGCGCGGTCCCGGCAGCTTCCATTGCGGACACCGCAGGCAGTGTCCTT
GTCCTCGAAGTCTGGCCCTTCTCGAGGCCGAAAGGTGATGCTGTCAGCGTTGGGCATGCTGGCCGCGGGG
GGTGCAGGGCTAGCTGTGGCCCTTCATTCTGCCGTGAGTGCCAGTGACCTGGAGCTGCACCCCCCCAGCT
ACCCATGGTCTCATCGTGGCCTCCTCTCCTCCTTGGACCACACCAGCATTCGGAGGGGTTTCCAGGTATA
CAAGCAGGTGTGCTCTTCCTGCCACAGCATGGATTATGTGGCGTACCGCCACCTGGTGGGAGTGTGCTAC
ACGGAGGAAGAAGCCAAGGCGCTGGCTGAGGAGGTGGAGGTCCAGGATGGCCCTAATGATGATGGGGAGA
TGTTCATGCGGCCAGGGAAGTTGTCTGACTATTTTCCAAAACCATACCCTAACCCTGAGGCTGCAAGAGC
TGCTAACAATGGAGCTTTACCCCCTGACCTCAGCTACATCGTTCGAGCTAGGCATGGTGGTGAGGACTAC
GTATTTTCCCTGCTCACTGGCTACTGTGAGCCCCCCACTGGGGTGTCATTGCGAGAAGGCCTCTATTTCA
ACCCTTACTTTCCCGGCCAGGCCATTGGCATGGCTCCTCCCATCTACACAGAAGTCTTGGAGTATGATGA
TGGCACCCCAGCTACCATGTCACAAGTAGCTAAGGATGTCGCCACCTTCCTTCGCTGGGCATCAGAACCA
GAGCATGACCATCGAAAACGCATGGGTCTCAAGATGTTGTTGATGATGGGCCTGCTGCTGCCCCTGACCT
ATGCCATGAAGCGGCATAAGTGGTCAGTCCTGAAGAGTCGAAAGCTGGCTTATCGGCCACCCAAGTGA

Translation (325 aa):
MAAAAASLRRTVLGPRGVGLPGASAPGLLGGARSRQLPLRTPQAVSLSSKSGPSRGRKVMLSALGMLAAG
GAGLAVALHSAVSASDLELHPPSYPWSHRGLLSSLDHTSIRRGFQVYKQVCSSCHSMDYVAYRHLVGVCY
TEEEAKALAEEVEVQDGPNDDGEMFMRPGKLSDYFPKPYPNPEAARAANNGALPPDLSYIVRARHGGEDY
VFSLLTGYCEPPTGVSLREGLYFNPYFPGQAIGMAPPIYTEVLEYDDGTPATMSQVAKDVATFLRWASEP
EHDHRKRMGLKMLLMMGLLLPLTYAMKRHKWSVLKSRKLAYRPPK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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