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Report for CCDS23784.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23784.1 Public Mus musculus 10 Marcks 23 108 98 CCDS HistoryNCBI Gene:17118Re-query CCDS DB by CCDS ID:23784.1Re-query CCDS DB by GeneID:17118See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23784.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000092584.5 ENSMUSP00000090245.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000092584.5Link to Ensembl Protein Viewer:ENSMUSP00000090245.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000092584Re-query CCDS DB by Protein ID:ENSMUSP00000090245
Original member Current member NCBI NM_008538.2 NP_032564.1 Accepted alive Link to Nucleotide Sequence:NM_008538.2Link to Protein Sequence:NP_032564.1Re-query CCDS DB by Nucleotide ID:NM_008538Re-query CCDS DB by Protein ID:NP_032564Link to BLAST:NP_032564.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032564.1 309 P26645 309 100% 0 0

Chromosomal Locations for CCDS 23784.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 37136108 37136935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 37138434 37138535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (930 nt):
ATGGGTGCCCAGTTCTCCAAGACCGCAGCGAAGGGAGAAGCCACCGCCGAGAGGCCCGGGGAGGCGGCTG
TGGCCTCGTCGCCTTCCAAAGCAAATGGGCAGGAGAATGGCCACGTAAAAGTGAACGGGGACGCGTCTCC
CGCCGCCGCCGAGCCGGGCGCCAAGGAGGAGCTGCAAGCCAACGGCAGCGCCCCGGCCGCCGACAAGGAG
GAGCCCGCGAGCGGCAGTGCCGCGACCCCCGCCGCGGCCGAAAAGGATGAGGCTGCCGCGGCCACCGAGC
CGGGCGCCGGCGCGGCCGACAAGGAGGCTGCGGAGGCCGAGCCCGCCGAGCCCAGCTCCCCGGCCGCCGA
GGCCGAGGGCGCGTCCGCCTCCTCCACGTCGTCGCCCAAGGCGGAGGACGGGGCCGCGCCGTCGCCCAGC
AGCGAGACCCCGAAAAAAAAAAAGAAGCGCTTTTCCTTCAAGAAGTCCTTCAAGCTGAGCGGCTTCTCCT
TCAAGAAGAGCAAGAAGGAGTCGGGCGAGGGCGCTGAAGCAGAGGGAGCGACCGCGGAAGGCGCCAAGGA
CGAGGCTGCAGCCGCAGCGGGCGGCGAGGGGGCCGCGGCCCCCGGGGAGCAGGCAGGCGGGGCGGGCGCC
GAGGGCGCGGCGGGCGGAGAGCCCCGGGAGGCCGAGGCGGCGGAGCCCGAGCAGCCGGAGCAGCCGGAGC
AGCCCGCGGCGGAGGAGCCGCAGGCGGAGGAGCAGTCGGAGGCGGCGGGGGAGAAGGCGGAGGAGCCCGC
GCCCGGCGCCACCGCGGGCGATGCGTCCTCCGCCGCAGGGCCTGAGCAGGAGGCGCCCGCTGCCACCGAC
GAGGCCGCGGCGTCCGCAGCCCCCGCCGCGTCGCCGGAGCCGCAGCCCGAGTGCAGTCCGGAGGCGCCCC
CCGCGCCAACGGCCGAGTAA

Translation (309 aa):
MGAQFSKTAAKGEATAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAEPGAKEELQANGSAPAADKE
EPASGSAATPAAAEKDEAAAATEPGAGAADKEAAEAEPAEPSSPAAEAEGASASSTSSPKAEDGAAPSPS
SETPKKKKKRFSFKKSFKLSGFSFKKSKKESGEGAEAEGATAEGAKDEAAAAAGGEGAAAPGEQAGGAGA
EGAAGGEPREAEAAEPEQPEQPEQPAAEEPQAEEQSEAAGEKAEEPAPGATAGDASSAAGPEQEAPAATD
EAAASAAPAASPEPQPECSPEAPPAPTAE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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