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Report for CCDS22565.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22565.1 Public Mus musculus 8 Ndrg4 23 108 98 CCDS HistoryNCBI Gene:234593Re-query CCDS DB by CCDS ID:22565.1Re-query CCDS DB by GeneID:234593See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22565.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000080666.7 ENSMUSP00000079495.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000080666.7Link to Ensembl Protein Viewer:ENSMUSP00000079495.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000080666Re-query CCDS DB by Protein ID:ENSMUSP00000079495
Original member NCBI NM_145602.3 NP_663577.1 Updated not alive Link to Nucleotide Sequence:NM_145602.3Link to Protein Sequence:NP_663577.1Re-query CCDS DB by Nucleotide ID:NM_145602Re-query CCDS DB by Protein ID:NP_663577
Current member NCBI NM_145602.4 NP_663577.1 Accepted alive Link to Nucleotide Sequence:NM_145602.4Link to Protein Sequence:NP_663577.1Re-query CCDS DB by Nucleotide ID:NM_145602Re-query CCDS DB by Protein ID:NP_663577Link to BLAST:NP_663577.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_663577.1 339 Q8BTG7-2 339 100% 0 0

Chromosomal Locations for CCDS 22565.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 95703157 95703177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95706188 95706293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95706531 95706651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95706737 95706799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95706929 95706989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95708608 95708694 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95708777 95708833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95709083 95709186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95709766 95709822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95709903 95709954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95710664 95710711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95710934 95710969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95711093 95711144 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95713178 95713332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1020 nt):
ATGCCGGAGTGCTGGGATGGGGAACATGACATCGAGACGCCTTATGGACTTCTGCATGTGGTGATCCGGG
GCTCTCCCAAAGGGAACCGCCCAGCCATCCTCACCTACCATGATGTGGGTCTCAATCACAAGCTGTGCTT
CAACACCTTCTTCAACTTTGAGGACATGCAGGAGATCACCAAACACTTTGTGGTGTGCCACGTGGATGCC
CCTGGGCAGCAGGTGGGAGCGTCACAGTTCCCTCAGGGGTACCAGTTCCCCTCCATGGAGCAGCTGGCCG
CCATGCTCCCGAGTGTGGTACAGCACTTTGGGTTTAAGTACGTGATTGGCATTGGAGTGGGAGCCGGAGC
CTACGTGCTGGCCAAGTTTGCACTCATCTTCCCTGACCTGGTGGAGGGGCTGGTGTTGATGAACATTGAC
CCCAACGGCAAAGGCTGGATTGACTGGGCTGCCACCAAGCTCTCTGGCTTGACCAGCACTTTACCAGACA
CTGTACTCTCCCATCTCTTCAGCCAGGAGGAGCTGGTGAACAACACGGAGCTGGTGCAGAGCTACCGGCA
GCAGATCTCAAACGTGGTGAACCAGGCCAACCTGCAGCTCTTCTGGAACATGTACAACAGCCGCAGAGAC
CTTGATATTAACCGACCTGGGACGGTGCCCAATGCCAAGACACTCCGCTGCCCAGTGATGCTGGTAGTCG
GAGATAATGCACCTGCTGAGGAAGGGGTGGTTGAGTGTAACTCCAAACTGGACCCAACCACTACGACCTT
CCTGAAGATGGCAGATTCTGGTGGTCTTCCTCAGGTGACACAACCAGGGAAGCTGACTGAGGCCTTCAAG
TACTTCCTGCAAGGCATGGGCTACATGCCCTCAGCCAGCATGACCCGCCTCGCACGCTCACGTACCGCGT
CCCTCACCAGCGCCAGTTCCGTGGACGGCAGCCGCCCTCAGCCCTGCGCCCACTCAGACAGCAGTGAGGG
GATGGGCCAGGTCAACCACACCATGGAGGTGTCCTGCTGA

Translation (339 aa):
MPECWDGEHDIETPYGLLHVVIRGSPKGNRPAILTYHDVGLNHKLCFNTFFNFEDMQEITKHFVVCHVDA
PGQQVGASQFPQGYQFPSMEQLAAMLPSVVQHFGFKYVIGIGVGAGAYVLAKFALIFPDLVEGLVLMNID
PNGKGWIDWAATKLSGLTSTLPDTVLSHLFSQEELVNNTELVQSYRQQISNVVNQANLQLFWNMYNSRRD
LDINRPGTVPNAKTLRCPVMLVVGDNAPAEEGVVECNSKLDPTTTTFLKMADSGGLPQVTQPGKLTEAFK
YFLQGMGYMPSASMTRLARSRTASLTSASSVDGSRPQPCAHSDSSEGMGQVNHTMEVSC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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