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Report for CCDS2065.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2065.1 Public Homo sapiens 2 MRPS9 24 110 108 CCDS HistoryNCBI Gene:64965Re-query CCDS DB by CCDS ID:2065.1Re-query CCDS DB by GeneID:64965See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2065.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000258455.8 ENSP00000258455.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000258455.8Link to Ensembl Protein Viewer:ENSP00000258455.3Re-query CCDS DB by Nucleotide ID:ENST00000258455Re-query CCDS DB by Protein ID:ENSP00000258455
Original member Current member NCBI NM_182640.3 NP_872578.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_182640.3Link to Protein Sequence:NP_872578.1Re-query CCDS DB by Nucleotide ID:NM_182640Re-query CCDS DB by Protein ID:NP_872578Link to BLAST:NP_872578.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_872578.1 396 P82933 396 100% 0 0

Chromosomal Locations for CCDS 2065.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 105038093 105038227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 105049171 105049350 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 105071313 105071375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 105071459 105071489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 105079983 105080062 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 105088984 105089069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 105089920 105089995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 105092401 105092569 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 105093530 105093638 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 105097155 105097324 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 105099670 105099761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1191 nt):
ATGGCGGCGCCCTGTGTGTCCTACGGCGGAGCAGTTTCGTACCGGCTTCTTCTCTGGGGTAGGGGTAGCC
TCGCCCGGAAGCAAGGCCTCTGGAAAACCGCGGCCCCTGAGTTGCAAACAAATGTCAGATCCCAGATATT
AAGGCTAAGACATACTGCATTTGTAATACCAAAGAAAAACGTTCCTACCTCAAAACGTGAAACTTACACA
GAGGATTTTATTAAAAAGCAGATTGAAGAGTTCAACATAGGAAAGAGACATTTAGCCAACATGATGGGAG
AAGATCCAGAAACTTTCACTCAAGAAGATATTGACAGAGCTATTGCTTACCTTTTCCCAAGTGGTTTGTT
TGAGAAACGAGCCAGGCCAGTAATGAAGCATCCTGAACAGATTTTTCCAAGACAAAGAGCAATCCAGTGG
GGAGAAGATGGCCGTCCATTTCACTATCTCTTCTATACTGGCAAACAGTCATACTATTCATTAATGCATG
ATGTATATGGAATGTTACTCAATTTAGAAAAACATCAAAGTCACTTGCAAGCCAAAAGTCTGCTCCCAGA
AAAAACTGTAACCAGAGACGTGATTGGCAGCAGATGGCTGATTAAGGAGGAACTAGAAGAAATGTTAGTG
GAAAAACTGTCAGATCTAGATTATATGCAGTTCATTCGGCTGCTAGAAAAGTTATTGACATCGCAGTGTG
GTGCTGCTGAGGAAGAATTTGTGCAGAGGTTTCGAAGAAGTGTAACTCTTGAATCAAAAAAACAGCTGAT
TGAACCTGTACAGTATGATGAGCAAGGAATGGCCTTTAGCAAAAGTGAAGGTAAAAGAAAGACTGCAAAA
GCAGAAGCAATTGTTTATAAACATGGAAGTGGAAGAATAAAAGTAAATGGAATTGATTACCAGCTTTACT
TCCCGATCACACAGGACAGAGAACAGCTGATGTTCCCTTTCCACTTTGTTGACCGGCTGGGAAAGCACGA
CGTGACCTGCACAGTCTCAGGGGGCGGGAGGTCAGCGCAGGCTGGAGCAATACGACTGGCAATGGCAAAA
GCCTTGTGCAGCTTTGTCACCGAGGACGAGGTCGAGTGGATGAGACAAGCTGGACTACTTACTACTGATC
CACGTGTGAGGGAACGGAAGAAGCCAGGCCAAGAGGGAGCCCGCAGAAAGTTTACGTGGAAGAAACGCTA
A

Translation (396 aa):
MAAPCVSYGGAVSYRLLLWGRGSLARKQGLWKTAAPELQTNVRSQILRLRHTAFVIPKKNVPTSKRETYT
EDFIKKQIEEFNIGKRHLANMMGEDPETFTQEDIDRAIAYLFPSGLFEKRARPVMKHPEQIFPRQRAIQW
GEDGRPFHYLFYTGKQSYYSLMHDVYGMLLNLEKHQSHLQAKSLLPEKTVTRDVIGSRWLIKEELEEMLV
EKLSDLDYMQFIRLLEKLLTSQCGAAEEEFVQRFRRSVTLESKKQLIEPVQYDEQGMAFSKSEGKRKTAK
AEAIVYKHGSGRIKVNGIDYQLYFPITQDREQLMFPFHFVDRLGKHDVTCTVSGGGRSAQAGAIRLAMAK
ALCSFVTEDEVEWMRQAGLLTTDPRVRERKKPGQEGARRKFTWKKR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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