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Report for CCDS18763.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
18763.1 Public Mus musculus 4 Ubxn11 23 108 98 CCDS HistoryNCBI Gene:67586Re-query CCDS DB by CCDS ID:18763.1Re-query CCDS DB by GeneID:67586See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 18763.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000074690.10 ENSMUSP00000074255.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000074690.10Link to Ensembl Protein Viewer:ENSMUSP00000074255.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000074690Re-query CCDS DB by Protein ID:ENSMUSP00000074255
Original member Current member NCBI NM_026257.3 NP_080533.1 Accepted alive Link to Nucleotide Sequence:NM_026257.3Link to Protein Sequence:NP_080533.1Re-query CCDS DB by Nucleotide ID:NM_026257Re-query CCDS DB by Protein ID:NP_080533Link to BLAST:NP_080533.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080533.1 484 Q9D572-1 484 100% 0 0

Chromosomal Locations for CCDS 18763.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 134108285 134108355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 134109091 134109119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 134109560 134109658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 134112515 134112609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 134112915 134112969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 134113357 134113433 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 134116031 134116157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 134123392 134123603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 134123842 134123919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 134124834 134124954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 134125066 134125169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 134126207 134126280 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 134126366 134126506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 134126586 134126757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1455 nt):
ATGAGCTCACCTCTGGCCTCTCTTAGCAAGACGCGGAAGGTGCCCCTAGAGTCGGAGTCTGTGAATCCTG
GGAGACGAGGGATAAGAGTCTACGGAAATGAAGATGAGGTGGACATGTGGAATGATGGCCAAGACTCAGA
AGAGAAGATCTCTCTGCCTTCCTGCTATGGAGGCATCGGTGCCCCTGTGAGTAGGCAAGGACCCCATGAC
TCAGAGCTGATGGCCTCCATGACCAGGAAGCTGCAGGAGCTGGAGCAGCAGTTGCAGGCCCAGAACGACG
AGATGCTGTCCAAGGAGCGGAAGATCCTGGACCTGGAGGATTTGGTACAGACCCTCCAGCAGCACCAGAA
CAATGCAGCCCTGCAGAGGCAGGAGGAGCTGGAGACACAATGCATTCAGCTGCAGCGGCAGATTGGTGAG
ATGGAGCGGTTTCTCAGCGACTATGGCCTGCAGTGGGTGGGCGAGCCCATGGACCAGGAGAACTCAGAGG
AAAAGACAGTCTCTGAAAATGATGAGCGAGACTGGATGAAGGCCAAGAAGTTTTGGAAGCCAGGGGATTC
TTTTGTGCCCCCCGAGGTGGACTTTGACAAACTGATGGCCAGTCTACAGGATCTGAGTGAGCTGGTGGAG
GGAGAGGCCCAGGTGACTCCGGTGCCTGGTGGGGCTCGGTTCCGTACCCTAGAGCCCATCCCGCTGAAGG
TCTACCGGAATGGCATTATGATGTTTGATGGGCCCTTCCGGCCCTTCTACGATCCCTCCACGCAGCGCTG
CCTCCGGGACATACTGGATGGCTTCTTTCCCTCAGAGCTGCAGAGGCTGTATCCTGATGGAGTCCCCTTT
AAGGTAAGTGACCTGCGAAATCAGATCTACCCAGAGGATGGTCTGGGCCAATTCCCAGGTGAGGGTCGTG
TGGTGGGCCGGCAGAAAATGCGCAAGGTCACAGACAGGGTGGAGGAGACTTCAGGCTCCAGGATGACTGC
TGAACAATTCCTGAACAGGCTTCCCAAGTGTATAATCCGACAAGGCGAGGTGATTGACATCCGGGGCCCC
ATCAGGGACACCTTGCAGAACTGCTGCCCAATGCCTGCCCGGATCCAGGAGATCATAGTGGAGACACCTG
CCTTGGCTTCTGAGCGGCAGAGGAGCCAGGAGTCACCTGACATGCCAATGCCTCTGCTCTCCATGCTTCG
CATCAAGTCCGAGAACGGAGAGCAGGCCTTCCTGCTGATGATGTGGCCTGAGGATACCATTGGCGACGTG
CGGAAACTCTTAGCACAGGCCAGGGACATGGATTCAGCTGCCTTTGAGATCTTGAGCACCTTCCCGCCCA
CGGTCTACCAGGACGATACAGTGACTCTGCAGGCCGCAGGCCTGGTTCCCAATGCAACGCTGCTGTTGCG
GACCCGCAGAGCCCTGCTGTCGAACCCCATCTCCCGCCCAGGCTCACTGCCCTGA

Translation (484 aa):
MSSPLASLSKTRKVPLESESVNPGRRGIRVYGNEDEVDMWNDGQDSEEKISLPSCYGGIGAPVSRQGPHD
SELMASMTRKLQELEQQLQAQNDEMLSKERKILDLEDLVQTLQQHQNNAALQRQEELETQCIQLQRQIGE
MERFLSDYGLQWVGEPMDQENSEEKTVSENDERDWMKAKKFWKPGDSFVPPEVDFDKLMASLQDLSELVE
GEAQVTPVPGGARFRTLEPIPLKVYRNGIMMFDGPFRPFYDPSTQRCLRDILDGFFPSELQRLYPDGVPF
KVSDLRNQIYPEDGLGQFPGEGRVVGRQKMRKVTDRVEETSGSRMTAEQFLNRLPKCIIRQGEVIDIRGP
IRDTLQNCCPMPARIQEIIVETPALASERQRSQESPDMPMPLLSMLRIKSENGEQAFLLMMWPEDTIGDV
RKLLAQARDMDSAAFEILSTFPPTVYQDDTVTLQAAGLVPNATLLLRTRRALLSNPISRPGSLP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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