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Report for CCDS16777.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
16777.1 Public Mus musculus 2 Chgb 23 108 98 CCDS HistoryNCBI Gene:12653Re-query CCDS DB by CCDS ID:16777.1Re-query CCDS DB by GeneID:12653See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 16777.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000028826.3 ENSMUSP00000028826.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000028826.3Link to Ensembl Protein Viewer:ENSMUSP00000028826.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000028826Re-query CCDS DB by Protein ID:ENSMUSP00000028826
Original member Current member NCBI NM_007694.5 NP_031720.1 Accepted alive Link to Nucleotide Sequence:NM_007694.5Link to Protein Sequence:NP_031720.1Re-query CCDS DB by Nucleotide ID:NM_007694Re-query CCDS DB by Protein ID:NP_031720Link to BLAST:NP_031720.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031720.1 677 P16014 677 100% 0 0

Chromosomal Locations for CCDS 16777.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 132781734 132781782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 132785984 132786030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 132786453 132786546 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 132792330 132794095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 132794752 132794829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2034 nt):
ATGCAGCCGGCTATGCTCCTCGGCCTCCTGGGCGCAGCGGCTCTGGCCGCTGTCAGCTCAGCTCCAGTGG
ATAACAGGGATCACAATGAAGAAATGGTGACTCGCTGCATTATCGAAGTCCTCTCAAATGCCCTATCCAA
GTCCAGTGTTCCAACGATCACCCCTGAGTGCCGGCAAGTCCTGAAGAAGAGTGGAAAAGAGGTCAAAGGT
GAAGAGAAAGGTGAAAACCAGAACTCGAAGTTTGAAGTACGGTTGCTAAGAGACCCAGCCGATGCCTCAG
GAACCCGCTGGGCCTCCAGTAGGGAGGATGCAGGCGCTCCAGTAGAAGACTCTCAAGGCCAGACGAAGGT
AGGCAATGAGAAGTGGACAGAAGGAGGAGGACACAGCCGAGAGGGAGTGGATGATCAAGAGAGTCTCCGT
CCCTCCAACCAACAAGCGTCCAAAGAAGCAAAGATATACCATTCGGAAGAGAGGGTGGGAAAAGAGAGGG
AGAAAGAAGAAGGCAAGATTTACCCAATGGGGGAGCACAGGGAAGATGCTGGTGAAGAGAAGAAACACAT
TGAAGATTCTGGAGAGAAGCCGAACACCTTCTCCAACAAAAGAAGCGAGGCTTCCGCTAAGAAAAAAGAT
GAGTCAGTGGCCAGAGCAGATGCACACTCCATGGAGCTGGAGGAGAAGACACACAGTAGGGAGCAAAGCA
GCCAGGAGAGTGGAGAGGAGACAAGGAGGCAGGAGAAACCCCAGGAGCTTACCGACCAGGACCAGAGCCA
GGAAGAATCCCAGGAAGGCGAGGAAGGTGAGGAAGGCGAGGAAGGCGAGGAAGGCGAGGAAGACTCAGCC
TCTGAAGTAACCAAACGCAGGCCCAGACACCACCACGGGAGAAGCGGGTCCAACAAGTCCTCTTACGAAG
GGCATCCTCTATCTGAGGAAAGGAGACCCTCTCCCAAGGAGTCCAAGGAGGCAGATGTGGCCACAGTCCG
TTTAGGGGAAAAAAGGAGTCACCATCTAGCTCACTACAGGGCTTCAGAAGAAGAACCTGAATATGGGGAA
GAATCGAGAAGCTATCGGGGACTACAGTACCGGGGTAGAGGAAGCGAAGAGGACAGAGCCCCAAGGCCTC
GGAGTGAGGAGAGTCAGGAAAGGGAGTATAAGAGAAACCACCCCGACTCTGAACTGGAAAGCACAGCAAA
CAGACATGGTGAAGAAACCGAGGAAGAGAGGAGCTACGAGGGGGCAAATGGACGCCAACACAGAGGCAGG
GGGCGGGAGCCAGGAGCCCATTCTGCTCTTGACACCAGAGAAGAAAAAAGGCTCTTGGATGAAGGGCACT
ACCCTGTTCGCGAAAGCCCAATAGATACGGCAAAAAGGTACCCACAAAGCAAATGGCAAGAGCAGGAGAA
AAACTACCTCAACTATGGCGAGGAAGGGGACCAAGGGAGATGGTGGCAGCAGGAAGAGCAGCTAGGACCG
GAAGAAAGCAGGGAGGAAGTAAGGTTTCCAGACAGACAATATGAGCCCTATCCCATCACTGAAAAGAGGA
AGAGGTTAGGGGCGCTGTTCAACCCGTACTTTGACCCTCTCCAGTGGAAGAATAGTGACTTTGAGAAAAG
AGGCAACCCAGATGACAGTTTTCTTGAGGATGAAGGTGAAGACAGAAATGGGGTGACCTTGACTGAGAAG
AATTCCTTCCCAGAGTACAACTATGACTGGTGGGAGAGAAGGCCCTTCTCAGAGGATGTGAATTGGGGAT
ATGAGAAGAGAAGCTTTGCCAGGGCCCCTCAGCTCGACTTGAAACGGCAATATGATGGAGTGGCCGAGTT
GGACCAGCTGCTTCACTACAGGAAGAAGGCAGACGAATTTCCCGATTTCTACGACTCGGAGGAGCAGATG
GGGCCTCACCAGGAGGCAAACGATGAAAAGGCCAGGGCTGACCAGAGAGTTCTGACGGCGGAAGAGAAAA
AGGAACTGGAGAACTTGGCTGCGATGGATCTGGAACTCCAGAAGATAGCGGAAAAGTTCAGCCAGCGGGG
CTGA

Translation (677 aa):
MQPAMLLGLLGAAALAAVSSAPVDNRDHNEEMVTRCIIEVLSNALSKSSVPTITPECRQVLKKSGKEVKG
EEKGENQNSKFEVRLLRDPADASGTRWASSREDAGAPVEDSQGQTKVGNEKWTEGGGHSREGVDDQESLR
PSNQQASKEAKIYHSEERVGKEREKEEGKIYPMGEHREDAGEEKKHIEDSGEKPNTFSNKRSEASAKKKD
ESVARADAHSMELEEKTHSREQSSQESGEETRRQEKPQELTDQDQSQEESQEGEEGEEGEEGEEGEEDSA
SEVTKRRPRHHHGRSGSNKSSYEGHPLSEERRPSPKESKEADVATVRLGEKRSHHLAHYRASEEEPEYGE
ESRSYRGLQYRGRGSEEDRAPRPRSEESQEREYKRNHPDSELESTANRHGEETEEERSYEGANGRQHRGR
GREPGAHSALDTREEKRLLDEGHYPVRESPIDTAKRYPQSKWQEQEKNYLNYGEEGDQGRWWQQEEQLGP
EESREEVRFPDRQYEPYPITEKRKRLGALFNPYFDPLQWKNSDFEKRGNPDDSFLEDEGEDRNGVTLTEK
NSFPEYNYDWWERRPFSEDVNWGYEKRSFARAPQLDLKRQYDGVAELDQLLHYRKKADEFPDFYDSEEQM
GPHQEANDEKARADQRVLTAEEKKELENLAAMDLELQKIAEKFSQRG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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