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Report for CCDS16750.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
16750.1 Public Mus musculus 2 Dnaaf9 23 108 98 CCDS HistoryNCBI Gene:228602Re-query CCDS DB by CCDS ID:16750.1Re-query CCDS DB by GeneID:228602See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 16750.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000044766.14 ENSMUSP00000046992.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000044766.14Link to Ensembl Protein Viewer:ENSMUSP00000046992.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000044766Re-query CCDS DB by Protein ID:ENSMUSP00000046992
Original member Current member NCBI NM_029432.2 NP_083708.1 Accepted alive Link to Nucleotide Sequence:NM_029432.2Link to Protein Sequence:NP_083708.1Re-query CCDS DB by Nucleotide ID:NM_029432Re-query CCDS DB by Protein ID:NP_083708Link to BLAST:NP_083708.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_083708.1 1179 Q7TT23 1179 100% 0 0

Chromosomal Locations for CCDS 16750.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 130709200 130709318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130709938 130710031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130710812 130710877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130712260 130712462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130712952 130713026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130713397 130713503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130717261 130717347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130719840 130719975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130727148 130727185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130730789 130730914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130736467 130736625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130737379 130737467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130738981 130739098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130739371 130739469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130740401 130740489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130741817 130741963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130748685 130748788 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130764453 130764540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130765688 130765738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130767610 130767680 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130770672 130770789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130775059 130775104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130775727 130775771 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130777205 130777281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130778417 130778504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130784424 130784460 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130785459 130785540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130791852 130791987 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130793989 130794044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130798167 130798265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130806871 130806948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130810822 130810928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130812845 130812941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130814179 130814303 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130820469 130820588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130822421 130822500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130839964 130840046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3540 nt):
ATGGACTCGTTCGACCCCCAGCAGCTGGGGCTGTCCCCCGCGCGCTTCGCTGGCACCTTTGGCAGTGGGG
CGGCCTCCGTCAGCTGCAGCCGACTCCGCCAGGTTCAAAGTGTCCTGACCCAGAGCAGCAAGTCTCAACC
TGATGGGATCCTCTGCATCCTCGGAATTGACAGCAGGTACAATGAAGGCTGTAGAGAGCTGGCAAATTAC
CTGCTTTTTGGTTTGTACAGTCAGAATGCCACTGATTTTGAGAAAACGGGATTTTCTGAAGAAATTCTAG
ATGACGTGATTTTATTGATTAAATCAGATAGTGTCCATCTGTACTGTAATCCCGTCAACTACCGCTATCT
TTTGCCTTACGTGGCACACTGGAGAAACCTGCATTTCCATTGCATGACGGAAAATGAGTATGAAGATGAG
GAAGCAGCAGAAGAATTTAAGATTTCCAGCTTTGTGGACATGGTTCGAGACTGTAGTAGGATTGGTATTC
CTTATAGCTCCCAAGGTCACTTACAGATATTTGATATGTTTGTGGTAGAGAAGTGGCCAATTGTCCAGGC
CTTTGCACTTGAAGGCATTGGAGGAGATGGATTTTTTACCATGAAATATGAGTTGCAGGACGTGAGTCTG
AGTCTGTGGAATGTCTACAGCAGGATGGACCCTGCGTCTCTGGAGAACATGCTTTCAGAAGACCTGGCGG
TGTTTGAGCATCAGTGGACGAGCTTCTTTGCTAACTTTGATACAGAAATCCCTTTCCTGCTGGAACTTTC
TGAATCTCAGGCGGGTGAGCCATTCAGAAGCTACTTCGGTCATGGAATGCTCTCCAGCCATATTACTGAA
AACAGCCCTCATCGGCAGCCTTTTGTTCTCTTTGGCAACCACTCCACACGGGACAACCTGAGCGCTGGCA
GCTTTAACTTCCCTTCTGAAGGGCACCTGGTGCGCAACACTGGTCCTGCAGGGAGCTTTGCCAAACACAT
GGTCGCTCAGTGTGTCTCACCAAAGGGACCTCTGGCCTGTTCAAGAACATACTTTTTTGGAGCTACTCAT
GTTCCTTATTTGGGTGACAACGAGAAGCTGCCCAGGACCACGGAGCAAATTAGGCTCTTATCCCAGATAT
ATGCTGCTGTTATTGAGGCTGTTTTGGCTGGCATTGCATGTTATGCTAAAACTTGCAGTCTGGCAAAGGC
CAAGGAAGTAGCAGAGCACACTCTGGAGTCTGGGTTAGTGTTCACTGAGTTGGTTCCATTCAAAGCAGAT
CTACGCTCCAAGGTGACTTTTCATATACATGCTGTGAATAACCAGGGAAGAATTGTGCCTCTGAATAATG
AAGATAGCTTATCCTTTGTGAAAACGGCTCGTATGACCGTCTATGACATTCCTGACCTGCTGGGAGGAGG
AGGAGGAGGATGCTTAGGGTCTGTGGTCTTCTCAGAGTCGTTTTTGACATCTCGGATCTTGGTTAAAGAA
AAAGATGGCACTATTACCCCAGAGACCAGCTACATCATCCTGACAGCTGCCATCCCCAGATTCTGTTCCT
GGCTGGTAGAAGATAGTGAAATAAAATTGTCTGAGAAAACCCTGCAAGCAACAAAGGGGGACGACTGTTG
CTTGGGCACTTTGCTAACAGGAGGAAAGGGAGCGTATCTTTATTCCAACAGTCCACAGTCCGGGCCTGAG
GAAGGGAGTGCGTATTTCTTCTCTGGTGGCCTTCTCTTTTCTCACCGTCATCACGGAAGTATCGTCATTG
CCAAGGAGCATGTGGATGCTTTCTCCTTCTATGATGGGGACTCCACCAGCGTAGTGGCCGCCCTTCTCAT
ACACTTCCGAAGCTCCATACTTCCTCATCTCCCAGTTCACTTCCACGGATCAAGCAACTTCCTGATGCTT
GCCCTTTTCCCCAAATCAAAGATATATCAAGCATTTTACTCAGAGGTCTTCTCTCCCTGGCAACAGCAGG
ATAACTCAGGGCTTTCTTTAAAAGTGATCCAGGAGGATGGATTATCTGCGGAACAAAAGAGATTGCACTC
CAATGCACAGAAGCTCTTCAGTGCGCTGAGCCCTCCTGCCCAGGACTGGAGCTCCCCAAAACTGCTCTCA
GGCAAACTTCCTGAGCTGGACCGGTTTCTCCAGCATTTTGCCATCGGCAGCATTGGTCAGGAGCCTGTGA
TGCGAGCCCATCTTGTGGGCCTGCTGCAGCAACCTGAGATGAGCCCTGCTCACGAAGTAGAGAGTGACAA
GGTTGTCATCAGCATTGTAACTGGTCTCCCAGGCTGTCATGCCAGCAAGCTCTGTGCTTTCCTGATCACT
CTGCATAAGGAGTATGGCAGATGGATGGTATACCGGCAAATCATGGACAGCTCTGAATGTTTCCATGCTG
CCCACTTCCAAAAATACCTTTCCAGTGCCCTGGAGGCCCAACAGAACCGTTCTGCCCGCCAGTCAGCTTA
CATCCGCAAGAAGACCAGGCTGCTGGTGGTACTACAAGGCTACACAGACGTCATTGATGTTGTGCAAGCC
CTGCAGACTCACCCAGACCCAAACGTCAGGTCCTACTTCACCATTGGTGCCGTCACGGTGTGTGTGGAGC
CCTTGAGCTGCTACATGGAGCACAGATTTCTCTTTCCTAAATGTCTTGACCAGTGTTCACAAGGTGTGGT
GAGTAACGTGGTGTTTACCAGTCACACAGCAGAGCAGAAGCACCCTCTCCTTGTTCAGCTGCAGACCCTC
ATCAGGGCTTCCAATCCTACCGCAGCCTTCATTCTTGCCGAAAATGGGATTGTCACAAGGAATGAAGACA
TTGAGCTGATTCTCTCAGAAAATAGTTTTTCGAGTCCCCAGATGCTACGTTCTCGATACTTACTGTTCCC
TGGCTGGTATGAAGGTAAATTTGATGCTGGATCCGTCTTTCCGCTAATGGTTCAGATCTGTGTGTGGTTT
GACTGTCCCCTGGAGAAAACCCGCTTTGTGAGCAGGTGCAGAGCAATTCAGTCTTCCATCAAGCCCAGTC
CCTTCTCTGGAAACATCTACCACATCCTTGGCAAAGTGAAATTTTCAGATTCTGAAAAGACCATGGAGGT
TTGCCACAATACTTTAACCAACTCCCTGACCATTGTGCCAGTTTTGGAGGGACCCACACCACCTCCCAAC
TCAAGAAGCAGCCCCCAAGACAACGGGCAGCCAGAATGCTACCTTGTGTTCATTGGCTGCTCCCTGAAGG
AGGACAGCCTCAAAGACTGGCTTCGACAGTCAGCTAAGCAGAGGCCTCAGAGGAAAGCTCTGAAAACCAG
GGGCATGCTGACCCAGCAAGAGATCAAGAACATCCATGTGAAACGCCACTTGGACCCCTTACCTGCAGGC
TATTTTTACAATGGCACCCAGTTTGTTAACTTCTTTGGGGACAAGACTGATTTTCACCCACTCATGGACC
AGTTCATGAATGATTATGTGGAAGAGGCCAATCGGGAGATCGAGAGGTACAACCGGGAGCTGGAGCAGCA
GGAATACCGGGACCTCTTTGAGCAGAAGCCGAAGCCCTAG

Translation (1179 aa):
MDSFDPQQLGLSPARFAGTFGSGAASVSCSRLRQVQSVLTQSSKSQPDGILCILGIDSRYNEGCRELANY
LLFGLYSQNATDFEKTGFSEEILDDVILLIKSDSVHLYCNPVNYRYLLPYVAHWRNLHFHCMTENEYEDE
EAAEEFKISSFVDMVRDCSRIGIPYSSQGHLQIFDMFVVEKWPIVQAFALEGIGGDGFFTMKYELQDVSL
SLWNVYSRMDPASLENMLSEDLAVFEHQWTSFFANFDTEIPFLLELSESQAGEPFRSYFGHGMLSSHITE
NSPHRQPFVLFGNHSTRDNLSAGSFNFPSEGHLVRNTGPAGSFAKHMVAQCVSPKGPLACSRTYFFGATH
VPYLGDNEKLPRTTEQIRLLSQIYAAVIEAVLAGIACYAKTCSLAKAKEVAEHTLESGLVFTELVPFKAD
LRSKVTFHIHAVNNQGRIVPLNNEDSLSFVKTARMTVYDIPDLLGGGGGGCLGSVVFSESFLTSRILVKE
KDGTITPETSYIILTAAIPRFCSWLVEDSEIKLSEKTLQATKGDDCCLGTLLTGGKGAYLYSNSPQSGPE
EGSAYFFSGGLLFSHRHHGSIVIAKEHVDAFSFYDGDSTSVVAALLIHFRSSILPHLPVHFHGSSNFLML
ALFPKSKIYQAFYSEVFSPWQQQDNSGLSLKVIQEDGLSAEQKRLHSNAQKLFSALSPPAQDWSSPKLLS
GKLPELDRFLQHFAIGSIGQEPVMRAHLVGLLQQPEMSPAHEVESDKVVISIVTGLPGCHASKLCAFLIT
LHKEYGRWMVYRQIMDSSECFHAAHFQKYLSSALEAQQNRSARQSAYIRKKTRLLVVLQGYTDVIDVVQA
LQTHPDPNVRSYFTIGAVTVCVEPLSCYMEHRFLFPKCLDQCSQGVVSNVVFTSHTAEQKHPLLVQLQTL
IRASNPTAAFILAENGIVTRNEDIELILSENSFSSPQMLRSRYLLFPGWYEGKFDAGSVFPLMVQICVWF
DCPLEKTRFVSRCRAIQSSIKPSPFSGNIYHILGKVKFSDSEKTMEVCHNTLTNSLTIVPVLEGPTPPPN
SRSSPQDNGQPECYLVFIGCSLKEDSLKDWLRQSAKQRPQRKALKTRGMLTQQEIKNIHVKRHLDPLPAG
YFYNGTQFVNFFGDKTDFHPLMDQFMNDYVEEANREIERYNRELEQQEYRDLFEQKPKP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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