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Report for CCDS12502.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12502.1 Public Homo sapiens 19 ZNF875 24 110 108 CCDS HistoryNCBI Gene:284459Re-query CCDS DB by CCDS ID:12502.1Re-query CCDS DB by GeneID:284459See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12502.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000324411.8 ENSP00000315505.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000324411.8Link to Ensembl Protein Viewer:ENSP00000315505.3Re-query CCDS DB by Nucleotide ID:ENST00000324411Re-query CCDS DB by Protein ID:ENSP00000315505
Original member Current member NCBI NM_181786.4 NP_861451.1 Accepted alive Link to Nucleotide Sequence:NM_181786.4Link to Protein Sequence:NP_861451.1Re-query CCDS DB by Nucleotide ID:NM_181786Re-query CCDS DB by Protein ID:NP_861451Link to BLAST:NP_861451.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_861451.1 659 P10072-1 659 100% 0 0

Chromosomal Locations for CCDS 12502.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 37344685 37344774 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37347190 37347316 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37347777 37347872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37362109 37363775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1980 nt):
ATGAGGGTCAACCACACAGTGTCTACAATGCTCCCTACATGCATGGTTCACAGACAAACCATGAGTTGTT
CCGGGGCTGGAGGAATAACGGCGTTCGTGGCATTCAGGGATGTGGCTGTGTACTTCACCCAGGAGGAGTG
GAGGTTGTTGAGCCCTGCTCAGAGGACCCTGCACAGGGAGGTGATGCTGGAGACTTATAACCATCTGGTC
TCACTGGAAATTCCATCTTCTAAACCAAAACTCATTGCTCAGCTGGAGCGAGGGGAAGCGCCCTGGAGAG
AGGAGAGAAAATGTCCACTGGACCTCTGTCCAGAATCGAAGCCAGAAATTCAACTTAGTCCCTCCTGCCC
TCTGATTTTCTCCAGTCAGCAAGCTCTCAGCCAACATGTGTGGCTGAGTCATCTCTCTCAGCTGTTTTCA
AGTTTATGGGCAGGAAATCCTCTCCACCTGGGAAAACACTATCCAGAAGATCAGAAACAACAGCAGGATC
CATTCTGCTTTAGTGGCAAAGCAGAATGGATTCAAGAGGGAGAAGACTCCAGACTCCTGTTTGGGAGAGT
AAGCAAAAATGGCACTTCAAAGGCACTTTCCAGCCCACCTGAAGAACAACAGCCAGCACAGTCCAAGGAA
GACAACACAGTGGTGGATATAGGGTCCAGCCCTGAACGGAGGGCAGATCTAGAGGAAACAGACAAAGTAT
TGCATGGTTTAGAAGTCTCAGGATTTGGAGAAATCAAATATGAAGAGTTTGGGCCAGGCTTTATCAAGGA
GTCAAACCTCCTTAGCCTCCAGAAGACACAAACTGGGGAGACACCTTACATGTACACTGAGTGGGGAGAC
AGCTTTGGCAGTATGTCAGTCCTCATCAAAAACCCAAGGACACACTCTGGGGGAAAGCCTTATGTGTGCA
GGGAATGTGGGCGAGGCTTTACGTGGAAGTCAAACCTGATCACACATCAGAGGACACACTCAGGGGAGAA
ACCTTATGTGTGCAAGGATTGTGGACGAGGCTTTACTTGGAAGTCGAACCTCTTTACACATCAGCGGACA
CACTCAGGGCTCAAGCCTTATGTGTGCAAGGAATGTGGGCAGAGCTTTAGCCTGAAGTCAAACCTCATTA
CCCACCAGAGGGCGCACACTGGGGAGAAGCCTTATGTTTGCAGGGAATGTGGGCGTGGCTTTCGCCAGCA
TTCACACCTGGTCAGACACAAGAGGACACATTCAGGAGAGAAGCCTTACATTTGCAGGGAGTGTGAGCAA
GGCTTTAGCCAGAAGTCACACCTCATCAGACACTTAAGGACACACACAGGAGAGAAGCCTTATGTATGCA
CAGAATGTGGGCGTCACTTTAGCTGGAAATCAAACCTCAAAACACACCAGAGGACACACTCAGGGGTTAA
ACCTTATGTCTGCCTGGAGTGCGGGCAGTGCTTTAGCCTGAAGTCAAACCTTAACAAACACCAGAGGTCA
CACACGGGGGAGAAGCCATTTGTATGTACGGAGTGTGGGCGAGGCTTTACCCGGAAATCAACCCTGAGCA
CGCACCAGAGGACACACTCAGGGGAGAAGCCATTTGTATGTGCTGAGTGTGGACGAGGCTTTAATGATAA
GTCCACCCTCATTTCACACCAGAGGACACATTCAGGGGAAAAGCCTTTTATGTGCAGGGAGTGTGGCAGA
AGGTTTCGGCAGAAGCCTAACCTGTTTAGGCACAAGAGGGCACACTCAGGTGCCTTTGTGTGCAGGGAGT
GTGGGCAAGGCTTTTGTGCTAAGTTAACTCTCATTAAACACCAGAGAGCACACGCAGGGGGGAAGCCTCA
TGTGTGCAGGGAGTGTGGGCAAGGCTTTAGCCGGCAGTCACACCTCATTAGACACCAGAGGACACATTCA
GGAGAGAAGCCTTATATTTGCAGAAAGTGTGGACGGGGCTTTAGTCGGAAGTCCAACCTTATCAGACATC
AGAGGACACACTCAGGATAG

Translation (659 aa):
MRVNHTVSTMLPTCMVHRQTMSCSGAGGITAFVAFRDVAVYFTQEEWRLLSPAQRTLHREVMLETYNHLV
SLEIPSSKPKLIAQLERGEAPWREERKCPLDLCPESKPEIQLSPSCPLIFSSQQALSQHVWLSHLSQLFS
SLWAGNPLHLGKHYPEDQKQQQDPFCFSGKAEWIQEGEDSRLLFGRVSKNGTSKALSSPPEEQQPAQSKE
DNTVVDIGSSPERRADLEETDKVLHGLEVSGFGEIKYEEFGPGFIKESNLLSLQKTQTGETPYMYTEWGD
SFGSMSVLIKNPRTHSGGKPYVCRECGRGFTWKSNLITHQRTHSGEKPYVCKDCGRGFTWKSNLFTHQRT
HSGLKPYVCKECGQSFSLKSNLITHQRAHTGEKPYVCRECGRGFRQHSHLVRHKRTHSGEKPYICRECEQ
GFSQKSHLIRHLRTHTGEKPYVCTECGRHFSWKSNLKTHQRTHSGVKPYVCLECGQCFSLKSNLNKHQRS
HTGEKPFVCTECGRGFTRKSTLSTHQRTHSGEKPFVCAECGRGFNDKSTLISHQRTHSGEKPFMCRECGR
RFRQKPNLFRHKRAHSGAFVCRECGQGFCAKLTLIKHQRAHAGGKPHVCRECGQGFSRQSHLIRHQRTHS
GEKPYICRKCGRGFSRKSNLIRHQRTHSG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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