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Report for CCDS18957.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
18957.1 Public Mus musculus 4 Kif1b 23 108 98 CCDS HistoryNCBI Gene:16561Re-query CCDS DB by CCDS ID:18957.1Re-query CCDS DB by GeneID:16561See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 18957.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000030806.5 ENSMUSP00000030806.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000030806.5Link to Ensembl Protein Viewer:ENSMUSP00000030806.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000030806Re-query CCDS DB by Protein ID:ENSMUSP00000030806
Original member Current member NCBI NM_008441.2 NP_032467.2 Accepted alive Link to Nucleotide Sequence:NM_008441.2Link to Protein Sequence:NP_032467.2Re-query CCDS DB by Nucleotide ID:NM_008441Re-query CCDS DB by Protein ID:NP_032467Link to BLAST:NP_032467.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032467.2 1150 Q60575-3 1150 99.913% 0 1

Chromosomal Locations for CCDS 18957.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 149237008 149238483 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 149245338 149245410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 149245542 149245722 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 149246337 149246420 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 149247228 149247334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 149247805 149247884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 149251741 149251816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 149253672 149253751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 149257870 149258003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 149262136 149262278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 149262699 149262777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 149263615 149263690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 149266252 149266317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 149267206 149267283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 149269862 149269973 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 149270717 149270895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 149273781 149273846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 149274916 149275095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 149276847 149276923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 149291302 149291407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3453 nt):
ATGTCGGGAGCCTCTGTGAAGGTCGCTGTTCGAGTGAGGCCCTTCAATTCTCGAGAGACCAGCAAGGAGT
CCAAGTGCATCATTCAGATGCAAGGCAACTCGACCAGTATTATTAACCCAAAGAACCCAAAGGAAGCACC
AAAGTCCTTCAGCTTTGACTACTCCTACTGGTCCCACACCTCGCCTGAAGATCCCTGTTTTGCATCGCAG
AATCGTGTGTACAATGACATTGGAAAGGAAATGCTCTTACATGCCTTTGAAGGTTATAATGTCTGTATCT
TTGCCTATGGGCAGACTGGTGCTGGGAAATCCTACACGATGATGGGGAAACAAGAAGAGAGCCAAGCTGG
AATCATCCCACAGTTGTGTGAAGAACTCTTTGAGAAGATCAATGACAATTGTAATGAAGAAATGTCTTAC
TCTGTAGAGGTGAGCTACATGGAAATTTACTGTGAGAGAGTACGAGATTTACTGAATCCCAAAAACAAGG
GTAACTTGCGTGTGCGTGAACACCCGCTTCTTGGACCCTATGTGGAGGATCTGTCCAAGCTGGCGGTCAC
CTCCTACACTGACATCGCTGACCTGATGGATGCTGGGAACAAAGCCAGGACTGTGGCAGCTACCAACATG
AATGAGACAAGCAGCCGTTCTCACGCTGTGTTCACCATTGTCTTTACCCAGAAGAAACAGGATCCTGAGA
CGAACCTTTCTACTGAGAAGGTCAGTAAAATCAGCTTGGTGGATCTAGCAGGAAGTGAACGGGCTGATTC
AACTGGTGCCAAAGGAACTCGATTAAAGGAAGGTGCAAATATCAATAAGTCCCTTACAACTTTGGGCAAA
GTCATTTCGGCCTTGGCAGAGGTGAGTAAAAAGAAGAAGAAAACTGATTTTATTCCTTATAGGGATTCTG
TACTTACTTGGCTCCTTCGAGAAAATCTCGGTGGCAACTCCCGAACTGCAATGGTTGCTGCTCTGAGCCC
AGCCGACATCAACTACGATGAAACTTTGAGCACACTGAGATACGCAGATCGTGCAAAACAAATTAAATGC
AATGCTGTTATCAATGAGGACCCGAATGCCAAGCTGGTTCGGGAGTTGAAGGAGGAAGTGACCCGACTGA
AGGACCTTCTTCGTGCTCAGGGACTGGGAGATATTATTGATACATCCATGGGGTCCCTCACTTCATCTCC
ATCTTCATGCTCACTTAATAGTCAGGTGGGCTTAACATCTGTGACCAGTATTCAGGAGAGGATCATGTCT
ACACCTGGAGGGGAGGAAGCCATTGAACGTCTGAAGGAGTCAGAGAAGATCATTGCTGAGTTGAATGAAA
CCTGGGAAGAGAAACTTCGTAAAACAGAGGCCATCAGAATGGAGAGAGAAGCCTTGTTGGCTGAGATGGG
AGTTGCCATACGGGAAGATGGGGGGACACTTGGAGTTTTCTCTCCTAAAAAGACCCCACATCTTGTTAAC
CTCAATGAAGACCCATTAATGTCGGAGTGTTTGCTCTATTACATCAAGGATGGAATTACAAGGGTTGGCC
AGGCAGATGCTGAGCGGCGCCAGGACATAGTGCTGAGTGGGGCCCACATTAAAGAGGAGCATTGTCTCTT
TCGGAGTGAGAGGAGCAACACTGGTGAAGTTATTGTGACCTTGGAGCCCTGTGAGCGCTCAGAAACATAC
GTGAATGGCAAGAGGGTGGCTCATCCTGTTCAGCTGCGCTCAGGGAACCGTATCATCATGGGTAAAAACC
ATGTTTTTCGTTTTAACCACCCTGAACAAGCGCGAGCAGAAAGGGAAAAGACTCCCTCAGCTGAGACCCC
CTCTGAGCCTGTGGACTGGACCTTTGCTCAGAGAGAGCTTCTCGAAAAACAAGGAATTGATATGAAACAG
GAGATGGAAAAGAGGCTTCAGGAAATGGAGATCCTTTACAAAAAGGAGAAGGAGGAAGCCGATCTTCTCC
TGGAGCAGCAGAGACTGGACGCGGATTCTGATAGCGGGGACGATTCTGACAAGCGATCCTGTGAAGAGAG
CTGGAAACTGATAACTTCTCTGAGAGAAAAGCTGCCTCCCAGCAAGTTACAAACCATTGTTAAAAAGTGT
GGCCTCCCCAGCAGTGGGAAGAAGCGAGAGCCAATCAAAATGTATCAGATCCCGCAAAGAAGGCGCCTGA
GCAAAGATTCCAAGTGGGTCACCATCTCAGATCTTAAGATCCAGGCTGTCAAAGAGATTTGCTATGAGGT
TGCCCTCAATGACTTTAGGCACAGTCGGCAGGAGATCGAAGCCTTGGCCATTGTTAAGATGAAAGAGCTT
TGTGCCATGTATGGGAAGAAAGATCCCAATGAGCGAGACTCTTGGAGGGCTGTGGCCAGGGATGTCTGGG
ACACTGTTGGGGTAGGGGATGAGAAGATTGAAGATATGATGGTCACTGGGAAAGGTGGAACCGATGTAGA
TGACCTCAAGGTTCACATAGACAAGCTGGAAGATATTTTGCAAGAAGTCAAAAAGCAAAATAATATGAAA
GACGAAGAGATCAAAGTCTTAAGAAATAAAATGCTCAAAATGGAGAAAGTCTTGCCATTGATTGGATCAC
AGGAACAGAAGAGTCAAGGAAGCCACAAGACAAAAGAGCCCCTAGTTGCTGGTGCTAACAGCGTCTCTGA
TAATGGTGTCAGTAAAGGAGAGAGTGGAGAACTTGGCAAAGAAGAGCGCGTTTCCCAGCTGATGAACGGG
GATCCAGCTTTTAGACGTGGACGTCTACGTTGGATGAGGCAAGAACAAATTCGGTTTAAGAACCTGCAAC
AGCAAGAGATAACAAAGCAGCTTCGTCGGCAGAACGTACCCCACAGGTTCATCCCTCCTGAGAACCGGAA
GCCCCGCTTTCCCTTTAAGAGCAATCCTAAACACAGAAACTCTTGGAGTCCTGGGACACATATTATTATA
ACAGAAGATGAGGTTATTGAGCTAAGAATTCCAAAAGATGAAGAAGGAAGAAAAGGAAATAAAGAAGAAA
GCCAAGAAAAAGTGGGCAGAGCAGCTTCTAGAGATGTACAGTCAGCGTGGGGCACAAGAAGTCAGGATCA
TATCCAAGTTAGCAAACAGCACATCAGCAACCAACAGCCACCACCTCAGCTACGGTGGAGAAGCAATTCT
CTCAATAACGGCCAACCGAAAACCACGCGCTGCCAGGCGACTGCCTCCTCGGAGTCCCTAAACTCCCACA
GCGGTCACCCCACCGCTGATCTACAAACTTTCCAGGCCAAGCGTCACATTCACCAACACCGGCAGCCTTA
CTGTAATTATAACACTGGAGGTCAGGTAGAGGGTAGCACAGCCAGCTGCTGTCAAAAGCAGACTGACAAG
CCCAGCCACTGTAACCAGTTCGTGACACCTCCGAGGATGAGGAGACAATTCTCAGCACCCAATCTCAAAG
CAGGTCGAGAAACCACAGTCTAG

Translation (1150 aa):
MSGASVKVAVRVRPFNSRETSKESKCIIQMQGNSTSIINPKNPKEAPKSFSFDYSYWSHTSPEDPCFASQ
NRVYNDIGKEMLLHAFEGYNVCIFAYGQTGAGKSYTMMGKQEESQAGIIPQLCEELFEKINDNCNEEMSY
SVEVSYMEIYCERVRDLLNPKNKGNLRVREHPLLGPYVEDLSKLAVTSYTDIADLMDAGNKARTVAATNM
NETSSRSHAVFTIVFTQKKQDPETNLSTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGK
VISALAEVSKKKKKTDFIPYRDSVLTWLLRENLGGNSRTAMVAALSPADINYDETLSTLRYADRAKQIKC
NAVINEDPNAKLVRELKEEVTRLKDLLRAQGLGDIIDTSMGSLTSSPSSCSLNSQVGLTSVTSIQERIMS
TPGGEEAIERLKESEKIIAELNETWEEKLRKTEAIRMEREALLAEMGVAIREDGGTLGVFSPKKTPHLVN
LNEDPLMSECLLYYIKDGITRVGQADAERRQDIVLSGAHIKEEHCLFRSERSNTGEVIVTLEPCERSETY
VNGKRVAHPVQLRSGNRIIMGKNHVFRFNHPEQARAEREKTPSAETPSEPVDWTFAQRELLEKQGIDMKQ
EMEKRLQEMEILYKKEKEEADLLLEQQRLDADSDSGDDSDKRSCEESWKLITSLREKLPPSKLQTIVKKC
GLPSSGKKREPIKMYQIPQRRRLSKDSKWVTISDLKIQAVKEICYEVALNDFRHSRQEIEALAIVKMKEL
CAMYGKKDPNERDSWRAVARDVWDTVGVGDEKIEDMMVTGKGGTDVDDLKVHIDKLEDILQEVKKQNNMK
DEEIKVLRNKMLKMEKVLPLIGSQEQKSQGSHKTKEPLVAGANSVSDNGVSKGESGELGKEERVSQLMNG
DPAFRRGRLRWMRQEQIRFKNLQQQEITKQLRRQNVPHRFIPPENRKPRFPFKSNPKHRNSWSPGTHIII
TEDEVIELRIPKDEEGRKGNKEESQEKVGRAASRDVQSAWGTRSQDHIQVSKQHISNQQPPPQLRWRSNS
LNNGQPKTTRCQATASSESLNSHSGHPTADLQTFQAKRHIHQHRQPYCNYNTGGQVEGSTASCCQKQTDK
PSHCNQFVTPPRMRRQFSAPNLKAGRETTV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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