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Report for CCDS15767.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15767.1 Public Mus musculus 2 Uap1l1 23 108 98 CCDS HistoryNCBI Gene:227620Re-query CCDS DB by CCDS ID:15767.1Re-query CCDS DB by GeneID:227620See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15767.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000102925.3 ENSMUSP00000099989.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000102925.3Link to Ensembl Protein Viewer:ENSMUSP00000099989.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000102925Re-query CCDS DB by Protein ID:ENSMUSP00000099989
Original member Current member NCBI NM_001033293.3 NP_001028465.1 Accepted alive Link to Nucleotide Sequence:NM_001033293.3Link to Protein Sequence:NP_001028465.1Re-query CCDS DB by Nucleotide ID:NM_001033293Re-query CCDS DB by Protein ID:NP_001028465Link to BLAST:NP_001028465.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001028465.1 507 Q3TW96-1 507 100% 0 0

Chromosomal Locations for CCDS 15767.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 25361647 25361739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25362071 25362137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25362663 25362848 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25363244 25363384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25363806 25363999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25364101 25364273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25364512 25364687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25364881 25365085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25365327 25365615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1524 nt):
ATGGACTCGGAGAGGGATGTACGCGCACAGCTGCAGCGTGCGGGCCAGGACCATCTCCTGCGCTTCTATG
CCGACCTGGCTCCGGAAGCCCGAGCCGCACTGCTAGCGGAGCTCGCCTCATTGGAGGCCGACGCGCTGCG
TGAGCACTGCCAGCGCGCCGCAGCTGCGGGCGCGCTAGCTCCGGGTCCTCTGCCGGACCTGGCTGCGCGC
CTGCAGCCCCTGCCCCCAGAACGCGTGGGCAGCGCGATCCGCTGTGACCAAGAGACACGCCTGCGGTGGG
AAGAGGAAGGTTTCCGACAGATTTCTCTGAACAAGGTAGCTGTCCTGCTGCTGGCGGGTGGGCAGGGCAC
TCGCCTGGGCGTCACATACCCAAAGGGCATGTATCAAGTTGGGCTGCCCAGCCAGAAGACCCTGTATCAA
CTGCAAGCAGAGCGGATCCGGCGTGTCCAACAGTTGGCTGACCAGCGACAGGGGACCCACTGCACTGTGC
CCTGGTACATCATGACCAGTGAGTTTACCCTGGGACCCACAATCAAGTTCTTCAAGGAGCATGACTTCTT
CCACCTGGACCCCACTAACGTAGTGCTGTTCGAGCAGCGCATGCTACCTGCTGTGACCTTTGAGGGCAAG
GCCATCCTGGAACGGAAAGACAAAGTTGCCATGGCCCCAGATGGCAACGGGGGTTTGTACTGTGCACTGG
CTGACCACCAGATCCTGGAGGACATGAAGCAGCGGGGTGTGGAGTTTGTGCATGTGTACTGCGTAGACAA
CATCTTGGTGCGGCTGGCTGACCCAGTCTTCATTGGCTTCTGTGTGCTTCAGGGAGCAGACTGTGGTGCT
AAGGTGGTGGAGAAAGCATACCCTGAGGAGCCAGTGGGTGTGGTGTGCCAGGTGGATGGTGTCCCCCAGG
TGGTGGAATACAGCGAGATCAGCCCTGAGATTGCTGGGCAGCTCGGGGCTGATGGAGGCTTGCTCTACAA
CGCAGGCAACATCTGCAACCATTTCTTCACCAGAGGCTTCCTGGATGTGGTTACCAGGGAGTTTGAGCCC
TTGCTGAGGCTGCATGTGGCCATGAAGAAGGTCCCATACGTGGATGAGGAGGGAAATCTGGTAAAGCCGC
TAAGACCGAATGGGATAAAGATGGAGAAGTTTGTGTTTGATGTGTTCCAGTTTGCTAAGAACTTTGTTGC
CTTTGAAGTGTGTCGGGAAGAGGAGTTCTCCCCTCTGAAGAATGATGACACAGCCGACAGGGACAACCCC
TCCACCTGCAGGAGAGCCTTGCTGGCTCAGCACTACCGCTGGGCTCTGCAGGCCGGAGCCCGCTTCCTGG
ATGTACACGGGGTCCAGCTTACGGAGCAGTCTGGCATGCTCCCAAATGGAGACCCTCCAGCCATCTGTGA
GATCTCGCCCTTGGTGTCTTACTCTGGAGAGGGGTTGGAAATGTACCTGCAAGGCCGACAACTCCAGTCT
CCATTCATTCTGGATGAGGACCAAGCCAGGCTGCTGCGGCCACAGGACTGCTAA

Translation (507 aa):
MDSERDVRAQLQRAGQDHLLRFYADLAPEARAALLAELASLEADALREHCQRAAAAGALAPGPLPDLAAR
LQPLPPERVGSAIRCDQETRLRWEEEGFRQISLNKVAVLLLAGGQGTRLGVTYPKGMYQVGLPSQKTLYQ
LQAERIRRVQQLADQRQGTHCTVPWYIMTSEFTLGPTIKFFKEHDFFHLDPTNVVLFEQRMLPAVTFEGK
AILERKDKVAMAPDGNGGLYCALADHQILEDMKQRGVEFVHVYCVDNILVRLADPVFIGFCVLQGADCGA
KVVEKAYPEEPVGVVCQVDGVPQVVEYSEISPEIAGQLGADGGLLYNAGNICNHFFTRGFLDVVTREFEP
LLRLHVAMKKVPYVDEEGNLVKPLRPNGIKMEKFVFDVFQFAKNFVAFEVCREEEFSPLKNDDTADRDNP
STCRRALLAQHYRWALQAGARFLDVHGVQLTEQSGMLPNGDPPAICEISPLVSYSGEGLEMYLQGRQLQS
PFILDEDQARLLRPQDC


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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