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Report for CCDS26807.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26807.1 Public Mus musculus 14 Dnase1l3 23 108 98 CCDS HistoryNCBI Gene:13421Re-query CCDS DB by CCDS ID:26807.1Re-query CCDS DB by GeneID:13421See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26807.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000026315.7 ENSMUSP00000026315.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000026315.7Link to Ensembl Protein Viewer:ENSMUSP00000026315.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000026315Re-query CCDS DB by Protein ID:ENSMUSP00000026315
Original member Current member NCBI NM_007870.3 NP_031896.3 Accepted alive Link to Nucleotide Sequence:NM_007870.3Link to Protein Sequence:NP_031896.3Re-query CCDS DB by Nucleotide ID:NM_007870Re-query CCDS DB by Protein ID:NP_031896Link to BLAST:NP_031896.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031896.3 310 O55070 310 100% 0 0

Chromosomal Locations for CCDS 26807.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 7967759 7967875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 7968088 7968184 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 7973971 7974128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 7977124 7977236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 7983055 7983167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 7984076 7984165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 7987304 7987392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 7993830 7993985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (933 nt):
ATGTCCCTGCACCCAGCTTCCCCACGCCTGGCCTCCCTGCTGCTCTTCATCCTTGCCCTCCATGACACCC
TGGCCCTAAGGCTCTGCTCCTTCAATGTGAGGTCCTTTGGAGCGAGCAAGAAGGAAAACCATGAAGCCAT
GGATATCATTGTGAAGATCATCAAACGCTGTGACCTTATACTGTTGATGGAAATCAAGGACAGCAGCAAC
AACATCTGTCCCATGCTGATGGAGAAGCTGAATGGAAATTCACGAAGAAGCACAACATACAACTATGTGA
TTAGTTCTCGACTTGGAAGAAACACGTACAAAGAGCAGTATGCCTTCGTCTACAAGGAGAAGCTGGTGTC
TGTGAAGACAAAATACCACTACCATGACTATCAGGATGGAGACACAGACGTGTTTTCCAGGGAGCCCTTT
GTGGTTTGGTTCCATTCCCCCTTTACTGCTGTCAAGGACTTCGTGATTGTCCCCTTGCACACAACTCCCG
AGACCTCCGTTAAAGAGATAGATGAGCTGGTCGATGTCTACACGGATGTGAGAAGCCAGTGGAAGACAGA
GAATTTCATCTTCATGGGTGATTTCAACGCCGGCTGTAGCTATGTCCCCAAGAAGGCCTGGCAGAACATT
CGTTTGAGGACGGACCCCAAGTTTGTTTGGCTGATTGGGGACCAAGAGGACACTACGGTCAAGAAGAGTA
CCAGCTGTGCCTATGACAGGATTGTGCTTTGTGGACAAGAGATAGTCAACTCCGTGGTTCCCCGTTCCAG
TGGCGTCTTTGACTTTCAGAAAGCTTATGACTTGTCTGAGGAGGAGGCCCTGGATGTCAGTGATCACTTT
CCAGTTGAGTTTAAGCTACAGTCTTCAAGGGCCTTCACCAACAACAGAAAATCTGTTTCTCTCAAAAAGA
GAAAAAAAGGCAATCGCTCCTAG

Translation (310 aa):
MSLHPASPRLASLLLFILALHDTLALRLCSFNVRSFGASKKENHEAMDIIVKIIKRCDLILLMEIKDSSN
NICPMLMEKLNGNSRRSTTYNYVISSRLGRNTYKEQYAFVYKEKLVSVKTKYHYHDYQDGDTDVFSREPF
VVWFHSPFTAVKDFVIVPLHTTPETSVKEIDELVDVYTDVRSQWKTENFIFMGDFNAGCSYVPKKAWQNI
RLRTDPKFVWLIGDQEDTTVKKSTSCAYDRIVLCGQEIVNSVVPRSSGVFDFQKAYDLSEEEALDVSDHF
PVEFKLQSSRAFTNNRKSVSLKKRKKGNRS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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