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Report for CCDS84499.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
84499.1 Public Mus musculus 2 Ntng2 23 108 98 CCDS HistoryNCBI Gene:171171Re-query CCDS DB by CCDS ID:84499.1Re-query CCDS DB by GeneID:171171See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 84499.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000091153.8 ENSMUSP00000088688.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000091153.8Link to Ensembl Protein Viewer:ENSMUSP00000088688.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000091153Re-query CCDS DB by Protein ID:ENSMUSP00000088688
Original member Current member NCBI NM_001305805.1 NP_001292734.1 Accepted alive Link to Nucleotide Sequence:NM_001305805.1Link to Protein Sequence:NP_001292734.1Re-query CCDS DB by Nucleotide ID:NM_001305805Re-query CCDS DB by Protein ID:NP_001292734Link to BLAST:NP_001292734.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001292734.1 564 Q8R4F1-3 564 100% 0 0

Chromosomal Locations for CCDS 84499.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 29194821 29195053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 29195647 29195781 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 29196982 29197149 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 29198814 29198915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 29204898 29204924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 29207418 29207590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 29227578 29228221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 29247828 29248040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1695 nt):
ATGCTGCGCCTGCTGGCTCTCTTCCTGCACTGCCTCCCGCTGGTCTCTGGGGACTATGACATCTGCAAAT
CCTGGGTGACCACAGATGAGGGCCCCACCTGGGAATTCTATGCCTGCCAGCCCAAGGTGATGCGCCTGAA
GGATTATGTCAAGGTCAAAGTGGAGCCCTCAGGCATCACGTGCGGAGACCCCCCTGAAAGGTTCTGTTCC
CATGAGAACCCCTACCTGTGCAGTAATGAGTGTGATGCCTCCAATCCCGACCTGGCCCACCCGCCCCGGC
TTATGTTTGACAGGGAAGATGAGGGACTGGCTACCTACTGGCAAAGCGTCACGTGGAGTCGCTACCCCAG
TCCACTAGAGGCCAACATCACCCTCTCATGGAACAAGAGCGTGGAGTTGACAGACGACGTGGTGGTGACT
TTTGAGTATGGCCGGCCCACGGTCATGGTCCTCGAGAAGTCCCTGGACAATGGCCGCACCTGGCAGCCCT
ACCAGTTCTATGCAGAGGACTGCATGGAGGCCTTCGGCATGTCTGCCCGACGTGCCCGAGACATGTCACC
CTCCAGCGCCCACCGGGTGCTCTGCACCGAGGAGTACTCACGCTGGGCAGGGTCCAAGAAAGAGAAGCAT
GTGCGCTTTGAGGTAAGGGACCGCTTTGCCATCTTTGCCGGCCCTGACCTGCGTAACATGGACAACCTGT
ACACGAGGATGGAGAGCGCCAAGGGCCTCAAGGAGTTCTTCACCTTCACTGACCTGCGCATGCGCCTGCT
GCGTCCTGCGCTGGGTGGCACCTACGTGCAGCGAGAGAACCTCTACAAGTACTTCTATGCCATCTCCAAT
ATCGAAGTCATTGGCAGGTGTAAGTGCAACCTGCATGCCAACCTGTGCACAGTGCGAGAGGGCAGCCTGC
AGTGTGAGTGTGAACACAACACCACGGGCCCCGACTGTGGCAGGTGCAAGAAGAACTTCCGCACACGCGC
CTGGCGAGCTGGCTCCTACCTGCCGCTGCCCCACGGCTCTCCCAATGCCTGTGCGGCCGCGGGCTCCGCC
TTTGGCACTGTAGCTATCTCTGTCGCTGTCCCTTCCCAAGCCAAGGACTCTACGCTTTTCGAGCTCAAGC
CCAGATCTCCTCAGGTGATACCCATTGAAGAATTTCAAGACTGCGAGTGCTACGGCCACTCCAACCGTTG
CAGCTACATTGACTTCCTGAACGTGGTGACCTGCGTCAGCTGTAAACACAACACTCGAGGCCAACACTGT
CAGCACTGCCGCCTGGGCTACTATCGCAATGGCTCCGCAGAGCTGGATGATGAGAACGTCTGCATTGAAT
GTAACTGTAACCAGATCGGCTCTGTGCACGATCGATGCAATGAGACAGGCTTCTGCGAGTGCAGGGAGGG
CGCAGTGGGGCCCAAGTGCGACGACTGCCTTCCTACACACTACTGGCGCCAAGGATGCTATCCCAATGTG
TGCGACGATGACCAGCTGCTCTGCCAGAATGGCGGCACCTGCCAGCAGAACCAACGCTGCGCCTGCCCGC
CCGGCTACACCGGCATTCGCTGTGAGCAGCCCCGCTGTGACCTCGCCGACGACGCTGGCCCGGACTGTGA
CCGCGCGCCAGGCATCGTCCCGCGCCCCGACACCCTGCTCGGATGCCTGCTGCTGCTCGGGCTGGCCGCC
CGTCTGGCCTGCTGA

Translation (564 aa):
MLRLLALFLHCLPLVSGDYDICKSWVTTDEGPTWEFYACQPKVMRLKDYVKVKVEPSGITCGDPPERFCS
HENPYLCSNECDASNPDLAHPPRLMFDREDEGLATYWQSVTWSRYPSPLEANITLSWNKSVELTDDVVVT
FEYGRPTVMVLEKSLDNGRTWQPYQFYAEDCMEAFGMSARRARDMSPSSAHRVLCTEEYSRWAGSKKEKH
VRFEVRDRFAIFAGPDLRNMDNLYTRMESAKGLKEFFTFTDLRMRLLRPALGGTYVQRENLYKYFYAISN
IEVIGRCKCNLHANLCTVREGSLQCECEHNTTGPDCGRCKKNFRTRAWRAGSYLPLPHGSPNACAAAGSA
FGTVAISVAVPSQAKDSTLFELKPRSPQVIPIEEFQDCECYGHSNRCSYIDFLNVVTCVSCKHNTRGQHC
QHCRLGYYRNGSAELDDENVCIECNCNQIGSVHDRCNETGFCECREGAVGPKCDDCLPTHYWRQGCYPNV
CDDDQLLCQNGGTCQQNQRCACPPGYTGIRCEQPRCDLADDAGPDCDRAPGIVPRPDTLLGCLLLLGLAA
RLAC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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