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Report for CCDS26549.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
26549.1 |
Public |
Mus musculus |
13 |
Ddx41 |
23 |
108 |
98 |
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Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Provisional (this record has not been manually reviewed by the collaboration)
Attributes |
CDS uses downstream AUG |
Sequence IDs included in CCDS 26549.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000021956.8 |
ENSMUSP00000021956.8 |
Accepted |
alive |
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NCBI |
NM_134059.2 |
NP_598820.2 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_598820.2 |
622 |
Q91VN6 |
622 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 26549.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1869 nt): ATGGAGGATTCGGAACCGGAGCGGAAGCGGGCACGCGCGGACGAGGCGACCGCGGGTGGGAGCCGCTCCG AGGACGAGGATGAGGACGACGAGGACTACGTACCCTATGTGCCGTTGCGGCAGCGCCGGCAGCTACTGCT CCAGAAGCTGCTGCAGCGAAGACGCAAGGGCGCTACGGAGGAAGAGCAGCAGGACAGTGGCAGTGAGCCC CGAGGAGATGAGGACGACATCCCGCTGGGCCCTCAGTCCAATGTCAGCCTCCTGGATCAGCACCAGCACC TCAAAGAGAAGGCTGAAGCACGCAAGGAGTCCGCCAAGGAAAAGCAACTGAAGGAAGAAGAAAAGATTCT GGAGAGTGTGGCTGAAGGCCGAGCCTTGATGTCAGTGAAGGAAATGGCCAAAGGCATCACCTATGACGAT CCAATCAAAACTAGTTGGACACCCCCGCGTTATGTCCTGAGCATGTCTGAGGAGCGGCATGAGCGAGTTC GGAAGAAGTATCACATCCTGGTGGAGGGCGATGGTATCCCGCCACCCATCAAGAGCTTCAAGGAGATGAA GTTTCCTGCAGCTATCCTTCGGGGCCTGAAAAAAAAGGGCATCCTCCACCCAACACCCATTCAGATCCAG GGCATCCCTACCATTCTGTCCGGTCGGGACATGATCGGCATTGCCTTCACGGGGTCAGGCAAGACACTGG TATTCACTCTGCCAGTCATCATGTTCTGCCTGGAACAGGAGAAGCGGTTGCCTTTCTCCAAGCGAGAGGG GCCTTATGGGCTCATCATCTGCCCCTCGCGAGAGCTGGCTCGGCAGACCCACGGCATCCTGGAGTATTAC TGCCGTCTGCTGCAGGAGGACAGCTCACCCCTCCTGCGCTGTGCCCTCTGCATCGGGGGCATGTCGGTGA AGGAGCAGATGGAGACCATCCGACATGGTGTGCACATGATGGTAGCCACACCTGGACGCCTCATGGATTT GCTGCAGAAGAAAATGGTCAGCCTAGACATCTGCCGCTACCTAGCCCTGGATGAAGCTGACCGCATGATT GACATGGGCTTTGAGGGTGACATTCGTACCATCTTCTCCTACTTCAAGGGCCAACGGCAGACTCTGCTCT TCAGTGCCACCATGCCGAAGAAGATTCAAAACTTTGCCAAGAGTGCCTTGGTAAAGCCTGTCACCATCAA TGTGGGTCGTGCTGGAGCAGCCAGCCTTGATGTCATCCAGGAGGTGGAGTATGTGAAGGAGGAAGCCAAG ATGGTGTACTTGCTTGAGTGCCTGCAGAAGACACCCCCACCTGTGCTCATCTTTGCAGAGAAGAAAGCAG ATGTGGATGCCATTCACGAATACCTCCTGCTCAAGGGTGTTGAGGCTGTAGCCATTCATGGGGGCAAAGA CCAGGAAGAGCGGACCAAGGCCATTGAGGCATTCCGGGAAGGCAAGAAGGACGTCTTAGTGGCCACAGAT GTGGCCTCTAAAGGCCTGGACTTTCCTGCCATCCAGCATGTCATCAACTATGACATGCCTGAAGAGATAG AAAACTATGTGCACAGAATTGGCCGCACTGGGCGTTCAGGAAACACAGGCATCGCTACCACCTTCATCAA CAAGGCCTGCGATGAGTCAGTGCTCATGGACCTCAAAGCCTTGTTGCTGGAGGCCAAGCAGAAGGTACCA CCTGTTCTGCAAGTGCTGCACTGTGGGGACGAGTCCATGCTGGACATTGGAGGAGAACGGGGCTGTGCCT TCTGTGGAGGCCTTGGCCATCGGATCACTGACTGCCCCAAACTTGAAGCTATGCAGACCAAGCAGGTCAG CAACATTGGCCGCAAGGACTACCTGGCCCACAGCTCCATGGACTTCTGA
Translation (622 aa): MEDSEPERKRARADEATAGGSRSEDEDEDDEDYVPYVPLRQRRQLLLQKLLQRRRKGATEEEQQDSGSEP RGDEDDIPLGPQSNVSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESVAEGRALMSVKEMAKGITYDD PIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGILHPTPIQIQ GIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYY CRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI DMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAK MVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATD VASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVP PVLQVLHCGDESMLDIGGERGCAFCGGLGHRITDCPKLEAMQTKQVSNIGRKDYLAHSSMDF
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