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Report for CCDS19071.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
19071.1 Public Mus musculus 5 Cyp51 23 108 98 CCDS HistoryNCBI Gene:13121Re-query CCDS DB by CCDS ID:19071.1Re-query CCDS DB by GeneID:13121See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 19071.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000001507.4 ENSMUSP00000001507.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000001507.4Link to Ensembl Protein Viewer:ENSMUSP00000001507.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000001507Re-query CCDS DB by Protein ID:ENSMUSP00000001507
Original member Current member NCBI NM_020010.2 NP_064394.2 Accepted alive Link to Nucleotide Sequence:NM_020010.2Link to Protein Sequence:NP_064394.2Re-query CCDS DB by Nucleotide ID:NM_020010Re-query CCDS DB by Protein ID:NP_064394Link to BLAST:NP_064394.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_064394.2 503 Q8K0C4 503 100% 0 0

Chromosomal Locations for CCDS 19071.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 4083125 4083303 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 4086460 4086628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 4087778 4087873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 4091845 4092040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 4092388 4092507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 4099124 4099298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 4100145 4100271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 4101178 4101354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 4102928 4103026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 4104134 4104307 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1512 nt):
ATGGTACTTCTGGGCTTGCTGCAGTCAGGCGGCTGGGTGCTCGGACAGGCGATGGAGCAGGTGACAGGAG
GCAACTTGCTTTCCACGCTGCTCATCGCCTGCGCCTTCACTCTCAGCCTCGTCTACCTGTTCCGTCTCGC
CGTGGGCCACATGGTCCAGCTGCCCGCTGGAGCGAAAAGTCCACCACATATTTACTCTCCAATTCCATTC
CTTGGCCATGCAATAGCATTTGGGAAAAGTCCAATTGAGTTTCTGGAAAATGCATATGAGAAGTATGGAC
CTGTGTTTAGCTTTACCATGGTGGGCAAGACCTTCACTTACCTTCTGGGGAGTGATGCAGCTGCGCTGCT
CTTCAATAGTAAAAACGAAGACCTGAATGCAGAAGAAGTCTACGGTCGGCTGACAACACCTGTGTTTGGG
AAGGGAGTTGCATATGATGTGCCAAATGCAATTTTCTTGGAACAGAAGAAAATCATAAAAAGTGGCCTTA
ACATAGCCCACTTTAAGCAGTATGTTCCTATCATTGAAAAAGAAGCAAAGGAATACTTTCAAAGTTGGGG
AGAAAGCGGAGAAAGAAATGTGTTTGAAGCACTGTCTGAGCTCATAATTTTGACAGCTAGCCATTGTTTA
CATGGAAAGGAAATTAGAAGTCAACTCAACGAGAAGGTGGCTCAGCTGTACGCAGACCTGGATGGAGGTT
TTACCCACGCTGCCTGGCTATTGCCAGCTTGGCTGCCTCTGCCAAGTTTCAGGCGCAGGGATAGAGCCCA
TCGAGAGATCAAGAATATTTTCTATAAGGCCATCCAGAAGCGCAGGCTGTCAAAAGAACCAGCTGAGGAC
ATTCTTCAAACTTTACTAGATTCTACATACAAGGACGGGCGTCCTCTAACAGATGAGGAGATATCAGGGA
TGCTCATCGGACTGCTGCTGGCTGGACAGCACACATCCTCCACCACCAGTGCCTGGATGGGCTTCTTTCT
GGCCAAAGATAAACCACTTCAAGAAAAATGCTACTTAGAACAGAAAGCAGTGTGTGGCGAGGATCTGCCT
CCTTTAACTTACGACCAGTTGAAGGATCTGAATTTACTTGATAGATGCATAAAAGAAACACTAAGACTGA
GGCCTCCAATAATGACCATGATGAGAATGGCCAAGACCCCTCAGACGGTGGCAGGGTACACCATTCCTCC
AGGACATCAGGTGTGTGTCTCTCCTACTGTCAATCAAAGACTGAAAGACTCCTGGGCAGAGCGCTTGGAC
TTTAATCCTGACCGCTACTTACAGGATAACCCAGCATCAGGAGAGAAGTTTGCCTATGTGCCATTTGGAG
CTGGGCGTCATCGTTGTGTTGGAGAAAATTTTGCCTATGTTCAAATTAAGACAATTTGGTCGACTATGCT
TCGTTTATATGAATTTGACCTCATCAATGGATATTTTCCCACTGTGAATTATACAACAATGATCCACACC
CCAGAAAACCCAGTAATCCGTTACAAACGACGATCAAAATGA

Translation (503 aa):
MVLLGLLQSGGWVLGQAMEQVTGGNLLSTLLIACAFTLSLVYLFRLAVGHMVQLPAGAKSPPHIYSPIPF
LGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEEVYGRLTTPVFG
KGVAYDVPNAIFLEQKKIIKSGLNIAHFKQYVPIIEKEAKEYFQSWGESGERNVFEALSELIILTASHCL
HGKEIRSQLNEKVAQLYADLDGGFTHAAWLLPAWLPLPSFRRRDRAHREIKNIFYKAIQKRRLSKEPAED
ILQTLLDSTYKDGRPLTDEEISGMLIGLLLAGQHTSSTTSAWMGFFLAKDKPLQEKCYLEQKAVCGEDLP
PLTYDQLKDLNLLDRCIKETLRLRPPIMTMMRMAKTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWAERLD
FNPDRYLQDNPASGEKFAYVPFGAGRHRCVGENFAYVQIKTIWSTMLRLYEFDLINGYFPTVNYTTMIHT
PENPVIRYKRRSK


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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