NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS29517.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29517.1 Public Mus musculus 19 Nudt22 23 108 98 CCDS HistoryNCBI Gene:68323Re-query CCDS DB by CCDS ID:29517.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 29517.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000041686.9 ENSMUSP00000041419.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000041686.9Link to Ensembl Protein Viewer:ENSMUSP00000041419.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000041686Re-query CCDS DB by Protein ID:ENSMUSP00000041419
Original member Current member EBI ENSMUST00000180765.1 ENSMUSP00000137738.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000180765.1Link to Ensembl Protein Viewer:ENSMUSP00000137738.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000180765Re-query CCDS DB by Protein ID:ENSMUSP00000137738
Original member Current member NCBI NM_026675.2 NP_080951.1 Accepted alive Link to Nucleotide Sequence:NM_026675.2Link to Protein Sequence:NP_080951.1Re-query CCDS DB by Nucleotide ID:NM_026675Re-query CCDS DB by Protein ID:NP_080951Link to BLAST:NP_080951.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080951.1 308 Q9DD16 308 100% 0 0

Chromosomal Locations for CCDS 29517.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 6993044 6993202 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6993433 6993526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6993662 6993759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6994671 6994769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6995242 6995718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (927 nt):
ATGGACCCCGAGGTGTCCCTGCTGCTGCTGTGCCCTCTTGGGGGACTTTCCCAGGAGCAGGTAGCAGTGG
AGCTGAGCCCGGCTCATGACCGTCGTCCATTGCCTGGAGGAGACAAGGCCATCACTGCCATCTGGGAGAC
TCGGCAACAGGCCCAACCTTGGATCTTTGATGCTCCCAAGTTCCGCCTTCACTCAGCCACACTGGTGTCC
AGCTCGCCTGAGCCACAGCTGCTCCTGCACTTGGGTCTAACTTCCTACCGGGACTTCCTGGGCACCAACT
GGTCCAGCTCAGCCTCCTGGCTGCGACAGCAGGGCGCTGCAGATTGGGGTGACAAGCAAGCCTATCTGGC
AGACCCACTGGGGGTGGGTGCCGCACTGGTCACAGCTGACGACTTCCTTGTCTTCCTGCGCCGCTCTCAG
CAGGTAGCGGAAGCTCCCGGACTGGTGGATGTACCCGGTGGGCACCCTGAACCTCAGGCCCTGTGCTCTG
GTGGCATCCCCCGGCACAAGGACCTCCCCGGGTTGCTGGTGGTACGAGAACTCTTCTCCAGTGTCCTACA
GGAGATCTGTGATGAGGTGAACCTGCCACTGCACACCTTGAGCCAGCCACTGTTGTTGGGAATCGCTTGC
AATGAGACCAGCGCGGGCAGAGCCAGTGCAGAGTTCTATGTCCAGTGCAGCTTGACTTCAGAGGAGGTCA
GGAGTTATTACCTGAGTGGGGGACCTGAGGCCCACGAGTCTACAGGAATCATCTTTGTGGAGACACAGAG
GGTACAGAGACTGCAGGAGACGGAGATGTGGGCACAACTCTGCCCCTCGGCCAAAGGCGCCATCCTCCTC
TACAATCGCCATCCACCTCTACAGTCAGGTGTTGGGAAGTCCCACCTGAGTCACCCTAGCGCCCCAGCCC
TATCACTGCAGCTCTGA

Translation (308 aa):
MDPEVSLLLLCPLGGLSQEQVAVELSPAHDRRPLPGGDKAITAIWETRQQAQPWIFDAPKFRLHSATLVS
SSPEPQLLLHLGLTSYRDFLGTNWSSSASWLRQQGAADWGDKQAYLADPLGVGAALVTADDFLVFLRRSQ
QVAEAPGLVDVPGGHPEPQALCSGGIPRHKDLPGLLVVRELFSSVLQEICDEVNLPLHTLSQPLLLGIAC
NETSAGRASAEFYVQCSLTSEEVRSYYLSGGPEAHESTGIIFVETQRVQRLQETEMWAQLCPSAKGAILL
YNRHPPLQSGVGKSHLSHPSAPALSLQL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH