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Report for CCDS14772.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14772.1 Public Homo sapiens Y SRY 24 110 108 CCDS HistoryNCBI Gene:6736Re-query CCDS DB by CCDS ID:14772.1See the combined annotation on chromosome Y in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14772.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000383070.2 ENSP00000372547.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000383070.2Link to Ensembl Protein Viewer:ENSP00000372547.1Re-query CCDS DB by Nucleotide ID:ENST00000383070Re-query CCDS DB by Protein ID:ENSP00000372547
Original member Current member NCBI NM_003140.3 NP_003131.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003140.3Link to Protein Sequence:NP_003131.1Re-query CCDS DB by Nucleotide ID:NM_003140Re-query CCDS DB by Protein ID:NP_003131Link to BLAST:NP_003131.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003131.1 204 Q05066 204 100% 0 0

Chromosomal Locations for CCDS 14772.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome Y (NC_000024.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome YSee the combined annotation on chromosome Y in Sequence Viewer

Chromosome Start Stop Links
Y 2786989 2787603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (615 nt):
ATGCAATCATATGCTTCTGCTATGTTAAGCGTATTCAACAGCGATGATTACAGTCCAGCTGTGCAAGAGA
ATATTCCCGCTCTCCGGAGAAGCTCTTCCTTCCTTTGCACTGAAAGCTGTAACTCTAAGTATCAGTGTGA
AACGGGAGAAAACAGTAAAGGCAACGTCCAGGATAGAGTGAAGCGACCCATGAACGCATTCATCGTGTGG
TCTCGCGATCAGAGGCGCAAGATGGCTCTAGAGAATCCCAGAATGCGAAACTCAGAGATCAGCAAGCAGC
TGGGATACCAGTGGAAAATGCTTACTGAAGCCGAAAAATGGCCATTCTTCCAGGAGGCACAGAAATTACA
GGCCATGCACAGAGAGAAATACCCGAATTATAAGTATCGACCTCGTCGGAAGGCGAAGATGCTGCCGAAG
AATTGCAGTTTGCTTCCCGCAGATCCCGCTTCGGTACTCTGCAGCGAAGTGCAACTGGACAACAGGTTGT
ACAGGGATGACTGTACGAAAGCCACACACTCAAGAATGGAGCACCAGCTAGGCCACTTACCGCCCATCAA
CGCAGCCAGCTCACCGCAGCAACGGGACCGCTACAGCCACTGGACAAAGCTGTAG

Translation (204 aa):
MQSYASAMLSVFNSDDYSPAVQENIPALRRSSSFLCTESCNSKYQCETGENSKGNVQDRVKRPMNAFIVW
SRDQRRKMALENPRMRNSEISKQLGYQWKMLTEAEKWPFFQEAQKLQAMHREKYPNYKYRPRRKAKMLPK
NCSLLPADPASVLCSEVQLDNRLYRDDCTKATHSRMEHQLGHLPPINAASSPQQRDRYSHWTKL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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