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Report for CCDS22647.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22647.1 Public Mus musculus 8 Cyb5b 23 108 98 CCDS HistoryNCBI Gene:66427Re-query CCDS DB by CCDS ID:22647.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22647.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000034400.4 ENSMUSP00000034400.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000034400.4Link to Ensembl Protein Viewer:ENSMUSP00000034400.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000034400Re-query CCDS DB by Protein ID:ENSMUSP00000034400
Original member Current member NCBI NM_025558.5 NP_079834.2 Accepted alive Link to Nucleotide Sequence:NM_025558.5Link to Protein Sequence:NP_079834.2Re-query CCDS DB by Nucleotide ID:NM_025558Re-query CCDS DB by Protein ID:NP_079834Link to BLAST:NP_079834.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079834.2 146 Q9CQX2 146 100% 0 0

Chromosomal Locations for CCDS 22647.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 107150712 107150873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 107169811 107169939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 107170391 107170420 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 107179414 107179442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 107183578 107183668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (441 nt):
ATGGCGACCCCGGAGGCCAGCGGCAGTGGCGAGAAGGTCGAGGGCTCCGAGCCCTCCGTCACCTACTACC
GGCTGGAGGAGGTGGCGAAGCGAAACTCGGCGGAAGAGACGTGGATGGTGATCCACGGGCGAGTCTACGA
TATCACCCGCTTCCTCAGCGAGCATCCTGGCGGGGAAGAGGTTCTGCTGGAACAAGCGGGTGCTGATGCA
ACTGAAAGCTTTGAAGATGTCGGCCACTCCCCTGATGCCAGGGAGATGCTAAAGCAGTACTACATTGGAG
ATGTCCATCCGAGTGACCTTAAACCTAAAGGCGATGACAAGGATCCTTCCAAGAACAATTCATGCCAAAG
TTCCTGGGCGTATTGGTTTGTCCCCATCGTGGGCGCTATTCTTATAGGTTTCTTGTATCGTCACTTCTGG
GCTGACAGCAAATCCTCCTGA

Translation (146 aa):
MATPEASGSGEKVEGSEPSVTYYRLEEVAKRNSAEETWMVIHGRVYDITRFLSEHPGGEEVLLEQAGADA
TESFEDVGHSPDAREMLKQYYIGDVHPSDLKPKGDDKDPSKNNSCQSSWAYWFVPIVGAILIGFLYRHFW
ADSKSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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